RNA–Protein interactions for RNA: ENST00000287263.8

RAB11FIP1-201, Transcript of RAB11 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP1, Length 6,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-201ENST00000287263 ZNF407Q9C0G0 2248 aa11.27□□□□□ -0.61
RAB11FIP1-201ENST00000287263 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
RAB11FIP1-201ENST00000287263 SCXQ7RTU7 201 aa11.26□□□□□ -0.61
RAB11FIP1-201ENST00000287263 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
RAB11FIP1-201ENST00000287263 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
RAB11FIP1-201ENST00000287263 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 RPL39P62891 51 aaKnown RBP11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 GTF3C1Q12789 2109 aa11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 ABCA1O95477 2261 aa11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 FAM110AQ9BQ89 295 aa11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 RHOHQ15669 191 aa11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 Q6ZS49 121 aa11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 RMI2Q96E14 147 aa11.25□□□□□ -0.61
RAB11FIP1-201ENST00000287263 WI2-2373I1.2A0A1W2PRP0 233 aa11.24□□□□□ -0.61
RAB11FIP1-201ENST00000287263 SNURFQ9Y675 71 aa11.24□□□□□ -0.61
RAB11FIP1-201ENST00000287263 C15orf65H3BRN8 121 aa11.24□□□□□ -0.61
RAB11FIP1-201ENST00000287263 GYPEP15421 78 aa11.24□□□□□ -0.61
RAB11FIP1-201ENST00000287263 MYLKQ15746 1914 aa11.24□□□□□ -0.61
RAB11FIP1-201ENST00000287263 DEFB1P60022 68 aa11.23□□□□□ -0.61
RAB11FIP1-201ENST00000287263 HEATR5AQ86XA9 2040 aa11.23□□□□□ -0.61
RAB11FIP1-201ENST00000287263 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP1-201ENST00000287263 LINC00643Q86TS7 51 aa11.22□□□□□ -0.61
RAB11FIP1-201ENST00000287263 CFPP27918 469 aa11.22□□□□□ -0.61
RAB11FIP1-201ENST00000287263 NPBQ8NG41 125 aa11.22□□□□□ -0.61
RAB11FIP1-201ENST00000287263 RIF1Q5UIP0 2472 aaKnown RBP11.22□□□□□ -0.61
RAB11FIP1-201ENST00000287263 NDUFA7O95182 113 aa11.21□□□□□ -0.61
RAB11FIP1-201ENST00000287263 LMO1P25800 156 aa11.21□□□□□ -0.61
RAB11FIP1-201ENST00000287263 DEFB135Q30KP9 77 aa11.21□□□□□ -0.61
RAB11FIP1-201ENST00000287263 HIGD1BQ9P298 99 aa11.21□□□□□ -0.61
RAB11FIP1-201ENST00000287263 PIP4P1Q86T03 277 aa11.21□□□□□ -0.62
RAB11FIP1-201ENST00000287263 MGAMO43451 1857 aa11.21□□□□□ -0.62
RAB11FIP1-201ENST00000287263 ENHOQ6UWT2 76 aa11.21□□□□□ -0.62
RAB11FIP1-201ENST00000287263 NDUFA11Q86Y39 141 aa11.21□□□□□ -0.62
RAB11FIP1-201ENST00000287263 C9orf66Q5T8R8 295 aa11.2□□□□□ -0.62
RAB11FIP1-201ENST00000287263 CENPVL3A0A0U1RRI6 287 aa11.2□□□□□ -0.62
RAB11FIP1-201ENST00000287263 GTSF1Q8WW33 167 aa11.2□□□□□ -0.62
RAB11FIP1-201ENST00000287263 TIMM17BO60830 172 aa11.2□□□□□ -0.62
RAB11FIP1-201ENST00000287263 IGLV1-44P01699 117 aa11.2□□□□□ -0.62
RAB11FIP1-201ENST00000287263 ELANEP08246 267 aa11.2□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PLA2G5P39877 138 aa11.2□□□□□ -0.62
RAB11FIP1-201ENST00000287263 ATP5G1P05496 136 aa11.19□□□□□ -0.62
RAB11FIP1-201ENST00000287263 TIRAPP58753 221 aa11.19□□□□□ -0.62
RAB11FIP1-201ENST00000287263 C1orf147Q96MC9 270 aaPredicted RBP11.19□□□□□ -0.62
RAB11FIP1-201ENST00000287263 TMEM14CQ9P0S9 112 aa11.19□□□□□ -0.62
RAB11FIP1-201ENST00000287263 AJUBAQ96IF1 538 aa11.19□□□□□ -0.62
RAB11FIP1-201ENST00000287263 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PLXNA3P51805 1871 aa11.19□□□□□ -0.62
RAB11FIP1-201ENST00000287263 NBASA2RRP1 2371 aa11.19□□□□□ -0.62
RAB11FIP1-201ENST00000287263 ADORA2A-AS1P86434 159 aa11.18□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PRR4Q16378 134 aa11.18□□□□□ -0.62
RAB11FIP1-201ENST00000287263 RSPO1Q2MKA7 263 aaPredicted RBP11.18□□□□□ -0.62
RAB11FIP1-201ENST00000287263 H0YGX0 51 aa11.18□□□□□ -0.62
RAB11FIP1-201ENST00000287263 H3BT86 120 aa11.18□□□□□ -0.62
RAB11FIP1-201ENST00000287263 ZNF491Q8N8L2 437 aa11.18□□□□□ -0.62
RAB11FIP1-201ENST00000287263 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 ETV2O00321 342 aaPredicted RBP11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PRR20EP86478 221 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PRR20CP86479 221 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PRR20DP86480 221 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PRR20BP86481 221 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PRR20AP86496 221 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 ZNF503Q96F45 646 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 CCL18P55774 89 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 IL15RAQ13261 267 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 KMT2EQ8IZD2 1858 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 LRCOL1A6NCL2 159 aa11.17□□□□□ -0.62
RAB11FIP1-201ENST00000287263 PLXNA4Q9HCM2 1894 aa11.16□□□□□ -0.62
RAB11FIP1-201ENST00000287263 C11orf86A6NJI1 115 aa11.16□□□□□ -0.62
RAB11FIP1-201ENST00000287263 WISP2O76076 250 aa11.16□□□□□ -0.62
RAB11FIP1-201ENST00000287263 TNRC6BQ9UPQ9 1833 aaKnown RBP11.16□□□□□ -0.62
RAB11FIP1-201ENST00000287263 A0A0J9YWU9 116 aa11.16□□□□□ -0.62
RAB11FIP1-201ENST00000287263 ODF1Q14990 250 aa11.16□□□□□ -0.62
RAB11FIP1-201ENST00000287263 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
RAB11FIP1-201ENST00000287263 GPR179Q6PRD1 2367 aa11.15□□□□□ -0.62
RAB11FIP1-201ENST00000287263 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
RAB11FIP1-201ENST00000287263 E9PLD3 99 aa11.15□□□□□ -0.63
RAB11FIP1-201ENST00000287263 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.63
RAB11FIP1-201ENST00000287263 A6NED7 52 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 DAZ2Q13117 558 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 DAZ4Q86SG3 579 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 DAZ3Q9NR90 486 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 SIP14410 1827 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 ETDCA0A1B0GVM5 59 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 SLPIP03973 132 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 TSC2P49815 1807 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 CXCL5P42830 114 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 NOTCH3Q9UM47 2321 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 DENND4AQ7Z401 1863 aa11.14□□□□□ -0.63
RAB11FIP1-201ENST00000287263 INSL3P51460 131 aa11.13□□□□□ -0.63
RAB11FIP1-201ENST00000287263 SEC61GP60059 68 aa11.13□□□□□ -0.63
RAB11FIP1-201ENST00000287263 NFE4Q86UQ8 179 aa11.13□□□□□ -0.63
RAB11FIP1-201ENST00000287263 IGKV4-1P06312 121 aa11.13□□□□□ -0.63
RAB11FIP1-201ENST00000287263 LINC00311Q8N616 119 aa11.13□□□□□ -0.63
RAB11FIP1-201ENST00000287263 H0Y9J4 135 aa11.13□□□□□ -0.63
RAB11FIP1-201ENST00000287263 RLFQ13129 1914 aa11.13□□□□□ -0.63
RAB11FIP1-201ENST00000287263 C2orf70A6NJV1 201 aa11.12□□□□□ -0.63
RAB11FIP1-201ENST00000287263 SPART-AS1P0CW21 52 aa11.12□□□□□ -0.63
RAB11FIP1-201ENST00000287263 XGP55808 180 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms