RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 CFC1BP0CG36 223 aa12.99□□□□□ -0.33
CROCCP3-201ENST00000263511 CFC1P0CG37 223 aa12.99□□□□□ -0.33
CROCCP3-201ENST00000263511 DEFB135Q30KP9 77 aa12.99□□□□□ -0.33
CROCCP3-201ENST00000263511 HHLA3Q9XRX5 114 aa12.99□□□□□ -0.33
CROCCP3-201ENST00000263511 A6NDX4 124 aa12.99□□□□□ -0.33
CROCCP3-201ENST00000263511 ODF3L1Q8IXM7 274 aa12.99□□□□□ -0.33
CROCCP3-201ENST00000263511 MSRB1Q9NZV6 116 aa12.99□□□□□ -0.33
CROCCP3-201ENST00000263511 TIRAPP58753 221 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 TINCRA0A1B0GVN0 87 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 PRAC2D3DTV9 90 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 C9orf153Q5TBE3 101 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 MSMPQ1L6U9 139 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 PRORYQ9H606 182 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 hADV29S1A0JD25 119 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 C12orf74Q32Q52 190 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 FAM167A-AS1Q96KT0 104 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 K7ERJ3 54 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 WISP2O76076 250 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 IFITM1P13164 125 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 DEFB105AQ8NG35 78 aa12.98□□□□□ -0.33
CROCCP3-201ENST00000263511 ANKHD1Q8IWZ3 2542 aaKnown RBP12.97□□□□□ -0.33
CROCCP3-201ENST00000263511 TRBV7-3A0A075B6L6 115 aa12.97□□□□□ -0.33
CROCCP3-201ENST00000263511 LRRC75A-AS1Q8N1F1 130 aa12.97□□□□□ -0.33
CROCCP3-201ENST00000263511 SPANXDQ9BXN6 97 aa12.97□□□□□ -0.33
CROCCP3-201ENST00000263511 ORMDL1Q9P0S3 153 aa12.97□□□□□ -0.33
CROCCP3-201ENST00000263511 TNFRSF13BO14836 293 aaPredicted RBP12.97□□□□□ -0.33
CROCCP3-201ENST00000263511 A0A0J9YXV3 536 aa12.96□□□□□ -0.33
CROCCP3-201ENST00000263511 HIST2H2BCQ6DN03 193 aa12.96□□□□□ -0.33
CROCCP3-201ENST00000263511 KLK5Q9Y337 293 aaPredicted RBP12.96□□□□□ -0.33
CROCCP3-201ENST00000263511 TRAV12-1A0A0B4J245 112 aa12.96□□□□□ -0.33
CROCCP3-201ENST00000263511 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.33
CROCCP3-201ENST00000263511 H3BMG7 143 aa12.96□□□□□ -0.33
CROCCP3-201ENST00000263511 DEFB125Q8N687 156 aa12.96□□□□□ -0.33
CROCCP3-201ENST00000263511 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
CROCCP3-201ENST00000263511 MED14OSP0DP75 135 aa12.96□□□□□ -0.34
CROCCP3-201ENST00000263511 PLA2G2EQ9NZK7 142 aa12.95□□□□□ -0.34
CROCCP3-201ENST00000263511 TMEM61Q8N0U2 210 aa12.95□□□□□ -0.34
CROCCP3-201ENST00000263511 MRPL36Q9P0J6 103 aaKnown RBP12.95□□□□□ -0.34
CROCCP3-201ENST00000263511 CACNA1AO00555 2505 aa12.95□□□□□ -0.34
CROCCP3-201ENST00000263511 LINC01545Q5VT33 79 aa12.95□□□□□ -0.34
CROCCP3-201ENST00000263511 OTOGLQ3ZCN5 2332 aa12.95□□□□□ -0.34
CROCCP3-201ENST00000263511 NCKAP5O14513 1909 aa12.95□□□□□ -0.34
CROCCP3-201ENST00000263511 PLA2G5P39877 138 aa12.94□□□□□ -0.34
CROCCP3-201ENST00000263511 COX7B2Q8TF08 81 aa12.94□□□□□ -0.34
CROCCP3-201ENST00000263511 NUPR1O60356 82 aa12.94□□□□□ -0.34
CROCCP3-201ENST00000263511 LMO4P61968 165 aa12.94□□□□□ -0.34
CROCCP3-201ENST00000263511 SND1-IT1Q9HBX3 110 aa12.94□□□□□ -0.34
CROCCP3-201ENST00000263511 CSPG4Q6UVK1 2322 aa12.93□□□□□ -0.34
CROCCP3-201ENST00000263511 NDUFA1O15239 70 aa12.93□□□□□ -0.34
CROCCP3-201ENST00000263511 PCP2Q8IVA1 136 aa12.93□□□□□ -0.34
CROCCP3-201ENST00000263511 E7EUB6 86 aa12.93□□□□□ -0.34
CROCCP3-201ENST00000263511 TNCP24821 2201 aa12.93□□□□□ -0.34
CROCCP3-201ENST00000263511 BAALC-AS2P0C853 105 aa12.93□□□□□ -0.34
CROCCP3-201ENST00000263511 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
CROCCP3-201ENST00000263511 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
CROCCP3-201ENST00000263511 FANCD2OSQ96PS1 177 aa12.92□□□□□ -0.34
CROCCP3-201ENST00000263511 IGHV4-4A0A075B6R2 117 aa12.92□□□□□ -0.34
CROCCP3-201ENST00000263511 DEFB4AO15263 64 aa12.92□□□□□ -0.34
CROCCP3-201ENST00000263511 FUSP35637 526 aaKnown RBP eCLIP12.92□□□□□ -0.34
CROCCP3-201ENST00000263511 UNQ9165/PRO28630Q6UXU0 137 aa12.92□□□□□ -0.34
CROCCP3-201ENST00000263511 CITED1Q99966 193 aa12.92□□□□□ -0.34
CROCCP3-201ENST00000263511 A0A0J9YX75 114 aa12.91□□□□□ -0.34
CROCCP3-201ENST00000263511 NDUFS5O43920 106 aa12.91□□□□□ -0.34
CROCCP3-201ENST00000263511 IGLV2-14P01704 120 aa12.91□□□□□ -0.34
CROCCP3-201ENST00000263511 SONP18583 2426 aaKnown RBP12.91□□□□□ -0.34
CROCCP3-201ENST00000263511 NTN5Q8WTR8 489 aaPredicted RBP12.91□□□□□ -0.34
CROCCP3-201ENST00000263511 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
CROCCP3-201ENST00000263511 H0YGX0 51 aa12.91□□□□□ -0.34
CROCCP3-201ENST00000263511 TRBV12-3P01733 135 aa12.91□□□□□ -0.34
CROCCP3-201ENST00000263511 KIF26AQ9ULI4 1882 aaPredicted RBP12.9□□□□□ -0.34
CROCCP3-201ENST00000263511 KMT2EQ8IZD2 1858 aa12.9□□□□□ -0.34
CROCCP3-201ENST00000263511 VSIG2Q96IQ7 327 aa12.9□□□□□ -0.34
CROCCP3-201ENST00000263511 C19orf84I3L1E1 186 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 PRO0255Q9UI72 69 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 ODF3BA8MYP8 253 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 DEFB1P60022 68 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 ANKRD29Q8N6D5 301 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 GTSF1Q8WW33 167 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 CXCL5P42830 114 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 CTRLP40313 264 aa12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 RPL39P62891 51 aaKnown RBP12.89□□□□□ -0.35
CROCCP3-201ENST00000263511 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
CROCCP3-201ENST00000263511 OPRPNQ99935 248 aaPredicted RBP12.88□□□□□ -0.35
CROCCP3-201ENST00000263511 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
CROCCP3-201ENST00000263511 PTPN13Q12923 2485 aa12.88□□□□□ -0.35
CROCCP3-201ENST00000263511 TRBV6-1A0A0K0K1D8 114 aa12.88□□□□□ -0.35
CROCCP3-201ENST00000263511 KLK12Q9UKR0 248 aa12.88□□□□□ -0.35
CROCCP3-201ENST00000263511 TIMM17AQ99595 171 aa12.88□□□□□ -0.35
CROCCP3-201ENST00000263511 C15orf53Q8NAA6 179 aa12.87□□□□□ -0.35
CROCCP3-201ENST00000263511 NACAE9PAV3 2078 aa12.86□□□□□ -0.35
CROCCP3-201ENST00000263511 SPAG11BQ08648 103 aa12.86□□□□□ -0.35
CROCCP3-201ENST00000263511 MUSTN1Q8IVN3 82 aa12.86□□□□□ -0.35
CROCCP3-201ENST00000263511 IGLL5B9A064 214 aa12.86□□□□□ -0.35
CROCCP3-201ENST00000263511 IGHV4-31P0DP07 118 aa12.86□□□□□ -0.35
CROCCP3-201ENST00000263511 CRYBA4P53673 196 aa12.86□□□□□ -0.35
CROCCP3-201ENST00000263511 UBE2AP49459 152 aa12.86□□□□□ -0.35
CROCCP3-201ENST00000263511 TOMM6Q96B49 74 aa12.86□□□□□ -0.35
CROCCP3-201ENST00000263511 LINC00574Q9H8X3 128 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms