RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SH3BGRL3Q9H299 93 aa2.78□□□□□ -1.96
TRA2B-201ENST00000259043 PARP11Q9NR21 331 aa2.78□□□□□ -1.96
TRA2B-201ENST00000259043 KCNIP2Q9NS61 270 aa2.78□□□□□ -1.96
TRA2B-201ENST00000259043 UQCC1Q9NVA1 299 aa2.78□□□□□ -1.96
TRA2B-201ENST00000259043 RFNGQ9Y644 331 aa2.78□□□□□ -1.96
TRA2B-201ENST00000259043 APOBP04114 4563 aaKnown RBP2.77□□□□□ -1.97
TRA2B-201ENST00000259043 IGHV6-1A0A0B4J1U7 121 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 IGHV1-3A0A0C4DH29 117 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 A0A1B0GW64 132 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 C9JQL5 133 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 UPK2O00526 184 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 CYB5BO43169 146 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 IFNA1P01562 189 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 IGKV1D-33P01593 117 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 IGKV1-33P01594 117 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 LINC00869P0C866 280 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 DEFA4P12838 97 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 ATP6V0CP27449 155 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 CEBPGP53567 150 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 HSPE1P61604 102 aaKnown RBP2.77□□□□□ -1.97
TRA2B-201ENST00000259043 PRCDQ00LT1 54 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 DEFA5Q01523 94 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 BTN1A1Q13410 526 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 MMDQ15546 238 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 ACOT6Q3I5F7 207 aaPredicted RBP2.77□□□□□ -1.97
TRA2B-201ENST00000259043 DPPA3Q6W0C5 159 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 LFNGQ8NES3 379 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 OR1L8Q8NGR8 309 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 SFT2D1Q8WV19 159 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 METTL26Q96S19 204 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 SEC11CQ9BY50 192 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 TMEM14BQ9NUH8 114 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 BET1LQ9NYM9 111 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 METTL1Q9UBP6 276 aaKnown RBP2.77□□□□□ -1.97
TRA2B-201ENST00000259043 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
TRA2B-201ENST00000259043 TRAV3A0A0B4J244 114 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 IZUMO1RA6ND01 250 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 F8W036 122 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 G3V318 75 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 MT-CO2P00403 227 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 CA2P00918 260 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 APOC3P02656 99 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 LGALS1P09382 135 aaKnown RBP2.76□□□□□ -1.97
TRA2B-201ENST00000259043 OR13C7P0DN81 318 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 RPL27AP46776 148 aaKnown RBP2.76□□□□□ -1.97
TRA2B-201ENST00000259043 ZNF137PP52743 207 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 SERF2P84101 59 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 AKIRIN2Q53H80 203 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 TMEM14EPQ6UXP3 125 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 SVBPQ8N300 66 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.76□□□□□ -1.97
TRA2B-201ENST00000259043 OR5T1Q8NG75 326 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 OR2T10Q8NGZ9 312 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 TMEM167AQ8TBQ9 72 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 CIRBP-AS1Q8TBR5 109 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 C18orf15Q96N68 181 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 RNF5Q99942 180 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 PSMG3Q9BT73 122 aaPredicted RBP2.76□□□□□ -1.97
TRA2B-201ENST00000259043 GGACTQ9BVM4 153 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 NPCDR1Q9BY65 106 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 PARD6GQ9BYG4 376 aaPredicted RBP2.76□□□□□ -1.97
TRA2B-201ENST00000259043 NKX6-2Q9C056 277 aaPredicted RBP2.76□□□□□ -1.97
TRA2B-201ENST00000259043 WDR61Q9GZS3 305 aaKnown RBP2.76□□□□□ -1.97
TRA2B-201ENST00000259043 WFDC10AQ9H1F0 79 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 NPVFQ9HCQ7 196 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 SLC39A9Q9NUM3 307 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 C21orf62Q9NYP8 219 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 CBY1Q9Y3M2 126 aa2.76□□□□□ -1.97
TRA2B-201ENST00000259043 IGKV2-28A0A075B6P5 120 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 TRAV1-1A0A0B4J248 108 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 MAP1LC3B2A6NCE7 125 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 RBFOX3A6NFN3 312 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 CORTO00230 105 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 ZNF324O75467 553 aaPredicted RBP2.75□□□□□ -1.97
TRA2B-201ENST00000259043 IGKV2D-28P01615 120 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 REG1AP05451 166 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 FABP1P07148 127 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 SFTA3P0C7M3 94 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 APELAP0DMC3 54 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 PSMB3P49720 205 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 B2MP61769 119 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 FXYD3Q14802 87 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 PMVKQ15126 192 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 PRSS8Q16651 343 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 GUK1Q16774 197 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 LCN15Q6UWW0 184 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 CLEC19AQ6UXS0 136 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 SLC25A29Q8N8R3 303 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 NECAP1Q8NC96 275 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 ORAOV1Q8WV07 137 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 ACY3Q96HD9 319 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 YPEL4Q96NS1 127 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 MAP1LC3BQ9GZQ8 125 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 FBXL15Q9H469 300 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 NDUFA4L2Q9NRX3 87 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 GNG13Q9P2W3 67 aa2.75□□□□□ -1.97
TRA2B-201ENST00000259043 TIMM9Q9Y5J7 89 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms