RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 RPL19P84098 196 aaKnown RBP7.86□□□□□ -1.15
SF3B6-201ENST00000233468 RHOHQ15669 191 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 VSIG2Q96IQ7 327 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
SF3B6-201ENST00000233468 CACNG7P62955 275 aa7.85□□□□□ -1.15
SF3B6-201ENST00000233468 FER1L6-AS1Q8NA97 138 aa7.85□□□□□ -1.15
SF3B6-201ENST00000233468 NUDT10Q8NFP7 164 aa7.85□□□□□ -1.15
SF3B6-201ENST00000233468 NUDT11Q96G61 164 aa7.85□□□□□ -1.15
SF3B6-201ENST00000233468 SFRP2Q96HF1 295 aa7.85□□□□□ -1.15
SF3B6-201ENST00000233468 RPP21Q9H633 154 aaKnown RBP7.85□□□□□ -1.15
SF3B6-201ENST00000233468 HECTD4Q9Y4D8 3996 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 A0A096LPF7 62 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 SMIM17P0DL12 118 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 GYPEP15421 78 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 ERVFC1-1P60608 527 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 TMEM241Q24JQ0 296 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 FAM231DQ6ZW35 169 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 NEGR1Q7Z3B1 354 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 C15orf54Q8N8G6 183 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 TPPP3Q9BW30 176 aa7.84□□□□□ -1.15
SF3B6-201ENST00000233468 IGHV3-73A0A0B4J1V6 119 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 A8MWL6 223 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 H3BS24 57 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 K7EN84 100 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 K7EQD1 137 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 GATCO43716 136 aaKnown RBP7.83□□□□□ -1.16
SF3B6-201ENST00000233468 NXPH4O95158 308 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 SOHLH1Q5JUK2 328 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 CLLU1Q5K131 121 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 FAM74A4Q5TZK3 123 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 ZNF575Q86XF7 245 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 SLC25A29Q8N8R3 303 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 AP1S3Q96PC3 154 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 NAT8Q9UHE5 227 aa7.83□□□□□ -1.16
SF3B6-201ENST00000233468 IGLC6P0CF74 106 aa7.82□□□□□ -1.16
SF3B6-201ENST00000233468 CT83Q5H943 113 aa7.82□□□□□ -1.16
SF3B6-201ENST00000233468 LINC01551Q86U37 167 aa7.82□□□□□ -1.16
SF3B6-201ENST00000233468 OR10AG1Q8NH19 301 aa7.82□□□□□ -1.16
SF3B6-201ENST00000233468 UPK3BQ9BT76 320 aa7.82□□□□□ -1.16
SF3B6-201ENST00000233468 KRTAP9-2Q9BYQ4 174 aa7.82□□□□□ -1.16
SF3B6-201ENST00000233468 RNASE7Q9H1E1 156 aaKnown RBP7.82□□□□□ -1.16
SF3B6-201ENST00000233468 MRPS16Q9Y3D3 137 aaKnown RBP7.82□□□□□ -1.16
SF3B6-201ENST00000233468 LINC00588Q9Y4M8 146 aa7.82□□□□□ -1.16
SF3B6-201ENST00000233468 A0A087WWL8 130 aa7.81□□□□□ -1.16
SF3B6-201ENST00000233468 TRGC1P0CF51 173 aa7.81□□□□□ -1.16
SF3B6-201ENST00000233468 GZMBP10144 247 aa7.81□□□□□ -1.16
SF3B6-201ENST00000233468 ESRGQ1W209 222 aa7.81□□□□□ -1.16
SF3B6-201ENST00000233468 SMIM15Q7Z3B0 74 aa7.81□□□□□ -1.16
SF3B6-201ENST00000233468 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.81□□□□□ -1.16
SF3B6-201ENST00000233468 BORCS7Q96B45 105 aa7.81□□□□□ -1.16
SF3B6-201ENST00000233468 OSTCQ9NRP0 149 aa7.81□□□□□ -1.16
SF3B6-201ENST00000233468 TRBV10-1A0A0K0K1A3 114 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 FAM231BA6NCW3 169 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 CRYGDP07320 174 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 TIRAPP58753 221 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 RAB4BP61018 213 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 TTC32Q5I0X7 151 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 UFSP1Q6NVU6 142 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 LYPD5Q6UWN5 251 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 LYZL1Q6UWQ5 148 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 SAMD10Q9BYL1 202 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 GFRA4Q9GZZ7 299 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 Q9H8V8 135 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 JPT2Q9H910 190 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 DNAH6Q9C0G6 4158 aa7.8□□□□□ -1.16
SF3B6-201ENST00000233468 MUC4Q99102 2169 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 MUC21A0A0G2JKD1 596 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 MUC21A0A140T8X8 626 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
SF3B6-201ENST00000233468 F5H697 171 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 CTRLP40313 264 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 SSTP61278 116 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 SRSF3P84103 164 aaKnown RBP7.79□□□□□ -1.16
SF3B6-201ENST00000233468 TWIST1Q15672 202 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 ADIRFQ15847 76 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 ZNF56Q15929 161 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 ZNRF2Q8NHG8 242 aa7.79□□□□□ -1.16
SF3B6-201ENST00000233468 TRAV9-2A0A087WT02 112 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 C9JQL5 133 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 H7C1H1 209 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 NTF3P20783 257 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 RPL23P62829 140 aaKnown RBP7.78□□□□□ -1.16
SF3B6-201ENST00000233468 RPL36AP83881 106 aaKnown RBP7.78□□□□□ -1.16
SF3B6-201ENST00000233468 UQCC3Q6UW78 93 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 C14orf178Q8N769 122 aaPredicted RBP7.78□□□□□ -1.16
SF3B6-201ENST00000233468 OR10G8Q8NGN5 311 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 ATP6V0E2Q8NHE4 81 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 TSKUQ8WUA8 353 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 RPL36ALQ969Q0 106 aaKnown RBP7.78□□□□□ -1.16
SF3B6-201ENST00000233468 ISOC2Q96AB3 205 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 CNFNQ9BYD5 112 aa7.78□□□□□ -1.16
SF3B6-201ENST00000233468 PKHD1P08F94 4074 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 RYR1P21817 5038 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 TRAV8-6A0A0B4J262 113 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 KRTAP9-6A0A140TA67 174 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 GAGE12JA6NER3 117 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 K7EP13 123 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms