RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 K7ERS5 55 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 SPAG11BQ08648 103 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 C4orf48Q5BLP8 95 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 ATP5EP2Q5VTU8 51 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 LINC00643Q86TS7 51 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 PRO0255Q9UI72 69 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 FREM3P0C091 2139 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 UQCRQO14949 82 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 IGLV2-14P01704 120 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 GTSF1Q8WW33 167 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 C11orf1Q9H5F2 150 aa5.53□□□□□ -1.52
CPS1-201ENST00000233072 A4D1N5 150 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 COX7BP24311 80 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 TMEM61Q8N0U2 210 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 A0A0J9YXV3 536 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 NCKAP5O14513 1909 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 GATA1P15976 413 aaPredicted RBP5.52□□□□□ -1.53
CPS1-201ENST00000233072 UFSP1Q6NVU6 142 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 OBSL1O75147 1896 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 ZFP36P26651 326 aaKnown RBP5.52□□□□□ -1.53
CPS1-201ENST00000233072 MIAQ16674 131 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 DNAJC9-AS1A6NH13 148 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
CPS1-201ENST00000233072 BLCAPP62952 87 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 Q6YL49 198 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 Q6ZUT4 128 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 SEM1Q6ZVN7 128 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 IGF1P05019 195 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 CRYGBP07316 175 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 C14orf132Q9NPU4 83 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 C20orf173Q96LM9 149 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 TMEM131Q92545 1883 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 P0C879 139 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 HIGD2BQ4VC39 106 aa5.51□□□□□ -1.53
CPS1-201ENST00000233072 TRAV26-1A0A087WT03 109 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 NDUFC1O43677 76 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 SPATA12Q7Z6I5 190 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 FANCD2OSQ96PS1 177 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 COL4A4P53420 1690 aaPredicted RBP5.5□□□□□ -1.53
CPS1-201ENST00000233072 PLXND1Q9Y4D7 1925 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 PRAC2D3DTV9 90 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 IGKV3D-7A0A0C4DH55 119 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 ODF1Q14990 250 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 NFE4Q86UQ8 179 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 TRBV12-3P01733 135 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 ANKRD39Q53RE8 183 aa5.5□□□□□ -1.53
CPS1-201ENST00000233072 KIAA1549LQ6ZVL6 1849 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 ZFAND2AQ8N6M9 145 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 HILS1P60008 231 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 A0A1B0GXF2 115 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 ASPHD1Q5U4P2 390 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 C3orf22Q8N5N4 141 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 ABCA7Q8IZY2 2146 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 IGLV10-54A0A075B6I4 117 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 NDUFV3P56181 108 aaKnown RBP5.49□□□□□ -1.53
CPS1-201ENST00000233072 RNASE8Q8TDE3 154 aaKnown RBP5.49□□□□□ -1.53
CPS1-201ENST00000233072 CCDC140Q96MF4 163 aa5.49□□□□□ -1.53
CPS1-201ENST00000233072 MDC1Q14676 2089 aaKnown RBP5.48□□□□□ -1.53
CPS1-201ENST00000233072 RPL39P62891 51 aaKnown RBP5.48□□□□□ -1.53
CPS1-201ENST00000233072 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 C11orf45Q8TAV5 145 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 MSRB1Q9NZV6 116 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 IGHV4-4A0A075B6R2 117 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 IGHV4-31P0DP07 118 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 DEFB135Q30KP9 77 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 TNRC6AQ8NDV7 1962 aaKnown RBP5.48□□□□□ -1.53
CPS1-201ENST00000233072 NUP210LQ5VU65 1888 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 IGKV1D-37A0A075B6S9 117 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 LECT2O14960 151 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 RS1O15537 224 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 EBI3Q14213 229 aa5.48□□□□□ -1.53
CPS1-201ENST00000233072 MIR7-3HGQ8N6C7 128 aa5.47□□□□□ -1.53
CPS1-201ENST00000233072 IGLC6P0CF74 106 aa5.47□□□□□ -1.53
CPS1-201ENST00000233072 LRRK1Q38SD2 2015 aa5.47□□□□□ -1.53
CPS1-201ENST00000233072 MIFP14174 115 aa5.47□□□□□ -1.53
CPS1-201ENST00000233072 PLA2G2EQ9NZK7 142 aa5.47□□□□□ -1.53
CPS1-201ENST00000233072 FXYD2P54710 66 aa5.47□□□□□ -1.53
CPS1-201ENST00000233072 EIF4EBP1Q13541 118 aaPredicted RBP5.46□□□□□ -1.53
CPS1-201ENST00000233072 HIST2H2BDQ6DRA6 164 aa5.46□□□□□ -1.53
CPS1-201ENST00000233072 LINC00173Q6ZV60 143 aa5.46□□□□□ -1.53
CPS1-201ENST00000233072 Q8NA96 180 aa5.46□□□□□ -1.53
CPS1-201ENST00000233072 ZNF706Q9Y5V0 76 aaPredicted RBP5.46□□□□□ -1.53
CPS1-201ENST00000233072 REG3AQ06141 175 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 SHISA2Q6UWI4 295 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 MUC7Q8TAX7 377 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 UPK3BQ9BT76 320 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 U3KQK5 164 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 WFDC2Q14508 124 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 KLK12Q9UKR0 248 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 KIF26AQ9ULI4 1882 aaPredicted RBP5.46□□□□□ -1.54
CPS1-201ENST00000233072 K7EQG2 157 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 COL4A3Q01955 1670 aa5.46□□□□□ -1.54
CPS1-201ENST00000233072 IBA57-AS1B1ANH7 110 aa5.45□□□□□ -1.54
CPS1-201ENST00000233072 LMO4P61968 165 aa5.45□□□□□ -1.54
CPS1-201ENST00000233072 UNQ9165/PRO28630Q6UXU0 137 aa5.45□□□□□ -1.54
CPS1-201ENST00000233072 TRBV6-4A0A1B0GX49 114 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms