RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 IGHV4-4A0A075B6R2 117 aa15.17■□□□□ 0.02
PPP1R3F-201ENST00000055335 IGLV4-69A0A075B6H9 119 aa15.17■□□□□ 0.02
PPP1R3F-201ENST00000055335 NPC2P61916 151 aa15.16■□□□□ 0.02
PPP1R3F-201ENST00000055335 CDSNQ15517 529 aa15.16■□□□□ 0.02
PPP1R3F-201ENST00000055335 MUC4Q99102 2169 aa15.16■□□□□ 0.02
PPP1R3F-201ENST00000055335 J3QQQ9 107 aa15.16■□□□□ 0.02
PPP1R3F-201ENST00000055335 ZNRF2Q8NHG8 242 aa15.16■□□□□ 0.02
PPP1R3F-201ENST00000055335 NTN5Q8WTR8 489 aaPredicted RBP15.16■□□□□ 0.02
PPP1R3F-201ENST00000055335 IGHV3-30P01768 117 aa15.15■□□□□ 0.02
PPP1R3F-201ENST00000055335 IGHV3-30-5P0DP03 117 aa15.15■□□□□ 0.02
PPP1R3F-201ENST00000055335 SDHAF1A6NFY7 115 aa15.15■□□□□ 0.02
PPP1R3F-201ENST00000055335 C2CD3Q4AC94 2353 aa15.15■□□□□ 0.02
PPP1R3F-201ENST00000055335 LINC01619G3V211 115 aa15.15■□□□□ 0.02
PPP1R3F-201ENST00000055335 C9orf139Q6ZV77 190 aa15.15■□□□□ 0.02
PPP1R3F-201ENST00000055335 RNF223E7ERA6 249 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 GPHB5Q86YW7 130 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 LINC00477Q96M19 166 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 CUBNO60494 3623 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 TRAV12-3A0A0B4J271 114 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 RNASE3P12724 160 aaKnown RBP15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 TCF15Q12870 199 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 ERG28Q9UKR5 140 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 FAM159AQ6UWV7 190 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 NACAE9PAV3 2078 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 MUC6Q6W4X9 2439 aa15.14■□□□□ 0.01
PPP1R3F-201ENST00000055335 SNCGO76070 127 aa15.13■□□□□ 0.01
PPP1R3F-201ENST00000055335 ZNF56Q15929 161 aa15.13■□□□□ 0.01
PPP1R3F-201ENST00000055335 LY6EQ16553 131 aa15.13■□□□□ 0.01
PPP1R3F-201ENST00000055335 SUMO4Q6EEV6 95 aa15.13■□□□□ 0.01
PPP1R3F-201ENST00000055335 HTN1P15515 57 aa15.13■□□□□ 0.01
PPP1R3F-201ENST00000055335 ZNF580Q9UK33 172 aa15.13■□□□□ 0.01
PPP1R3F-201ENST00000055335 GAGE2BQ13066 116 aa15.12■□□□□ 0.01
PPP1R3F-201ENST00000055335 GAGE2EQ4V326 116 aa15.12■□□□□ 0.01
PPP1R3F-201ENST00000055335 GAGE2DQ9UEU5 116 aa15.12■□□□□ 0.01
PPP1R3F-201ENST00000055335 TRBV7-1A0A0A6YYK4 115 aa15.12■□□□□ 0.01
PPP1R3F-201ENST00000055335 MINOS1Q5TGZ0 78 aa15.12■□□□□ 0.01
PPP1R3F-201ENST00000055335 MINOS1-NBL1R4GNA1 71 aa15.12■□□□□ 0.01
PPP1R3F-201ENST00000055335 SLC25A29Q8N8R3 303 aa15.11■□□□□ 0.01
PPP1R3F-201ENST00000055335 MUSTN1Q8IVN3 82 aa15.11■□□□□ 0.01
PPP1R3F-201ENST00000055335 TRAV4A0A0B4J268 109 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 CRLF1O75462 422 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 ELANEP08246 267 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 TTC32Q5I0X7 151 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 BRD3OSQ6XYD6 125 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 TRAV12-2A0A075B6T6 113 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 TRAV41A0A0B4J266 112 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 TEX49A0A1B0GTD5 131 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 IGIPA6NJ69 53 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 EBI3Q14213 229 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 MRPL53Q96EL3 112 aaKnown RBP15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 AJUBAQ96IF1 538 aa15.1■□□□□ 0.01
PPP1R3F-201ENST00000055335 VCYO14598 125 aa15.09■□□□□ 0.01
PPP1R3F-201ENST00000055335 RNASE13Q5GAN3 156 aaKnown RBP15.09■□□□□ 0.01
PPP1R3F-201ENST00000055335 PAPPA-AS1Q5QFB9 102 aa15.09■□□□□ 0.01
PPP1R3F-201ENST00000055335 SPXQ9BT56 116 aa15.09■□□□□ 0.01
PPP1R3F-201ENST00000055335 PF4V1P10720 104 aa15.09■□□□□ 0.01
PPP1R3F-201ENST00000055335 TMEM262E9PQX1 116 aa15.08■□□□□ 0.01
PPP1R3F-201ENST00000055335 OVOL1O14753 267 aa15.08■□□□□ 0
PPP1R3F-201ENST00000055335 SVIPQ8NHG7 77 aa15.08■□□□□ 0
PPP1R3F-201ENST00000055335 OOSP1A8MZH6 123 aa15.08■□□□□ 0
PPP1R3F-201ENST00000055335 EDN2P20800 178 aa15.08■□□□□ 0
PPP1R3F-201ENST00000055335 PPP1R17O96001 155 aa15.07■□□□□ 0
PPP1R3F-201ENST00000055335 A0A0J9YXV3 536 aa15.07■□□□□ 0
PPP1R3F-201ENST00000055335 ITLN2Q8WWU7 325 aaPredicted RBP15.07■□□□□ 0
PPP1R3F-201ENST00000055335 IGHV3-73A0A0B4J1V6 119 aa15.07■□□□□ 0
PPP1R3F-201ENST00000055335 CENPVL3A0A0U1RRI6 287 aa15.07■□□□□ 0
PPP1R3F-201ENST00000055335 GAGE5Q13069 117 aa15.07■□□□□ 0
PPP1R3F-201ENST00000055335 GAGE6Q13070 117 aa15.07■□□□□ 0
PPP1R3F-201ENST00000055335 Q8N1Y9 231 aa15.06■□□□□ 0
PPP1R3F-201ENST00000055335 RHPN1-AS1Q9BWJ2 59 aa15.06■□□□□ 0
PPP1R3F-201ENST00000055335 IGHV3-33P01772 117 aa15.05■□□□□ -0
PPP1R3F-201ENST00000055335 SIRPDQ9H106 197 aa15.05■□□□□ -0
PPP1R3F-201ENST00000055335 NCOR2Q9Y618 2525 aa15.05■□□□□ -0
PPP1R3F-201ENST00000055335 KLK9Q9UKQ9 250 aa15.04■□□□□ -0
PPP1R3F-201ENST00000055335 U3KQE9 123 aa15.04■□□□□ -0
PPP1R3F-201ENST00000055335 HIVEP3Q5T1R4 2406 aa15.04■□□□□ -0
PPP1R3F-201ENST00000055335 UBE2E1P51965 193 aa15.04■□□□□ -0
PPP1R3F-201ENST00000055335 Q6ZSV7 163 aa15.04■□□□□ -0
PPP1R3F-201ENST00000055335 C3orf56Q8N813 242 aa15.04■□□□□ -0
PPP1R3F-201ENST00000055335 VCX2Q9H322 139 aa15.04■□□□□ -0
PPP1R3F-201ENST00000055335 LENEPQ9Y5L5 61 aa15.04■□□□□ -0
PPP1R3F-201ENST00000055335 EIF4EBP3O60516 100 aaPredicted RBP15.03■□□□□ -0
PPP1R3F-201ENST00000055335 POLR2KP53803 58 aaKnown RBP15.03■□□□□ -0
PPP1R3F-201ENST00000055335 MDFICQ9P1T7 246 aa15.03■□□□□ -0
PPP1R3F-201ENST00000055335 CCDC179H3BU77 68 aa15.02■□□□□ -0
PPP1R3F-201ENST00000055335 ZNF876PQ49A33 203 aa15.02■□□□□ -0
PPP1R3F-201ENST00000055335 IGF2-ASQ6U949 168 aa15.02■□□□□ -0
PPP1R3F-201ENST00000055335 C5orf56Q8N8D9 126 aa15.02■□□□□ -0
PPP1R3F-201ENST00000055335 IGHV1-69DA0A0B4J2H0 117 aa15.02■□□□□ -0
PPP1R3F-201ENST00000055335 LINC00315P59091 139 aa15.02■□□□□ -0
PPP1R3F-201ENST00000055335 CEMP1Q6PRD7 247 aaPredicted RBP15.02■□□□□ -0
PPP1R3F-201ENST00000055335 TMEM141Q96I45 108 aa15.02■□□□□ -0
PPP1R3F-201ENST00000055335 BPESC1Q9GZL8 116 aa15.02■□□□□ -0
PPP1R3F-201ENST00000055335 TRAV8-4A0A0B4J246 113 aa15.02□□□□□ -0.01
PPP1R3F-201ENST00000055335 PRRC2AP48634 2157 aaKnown RBP15.01□□□□□ -0.01
PPP1R3F-201ENST00000055335 TRAV8-3A0A0A6YYJ7 113 aa15.01□□□□□ -0.01
PPP1R3F-201ENST00000055335 NPFFO15130 113 aa15.01□□□□□ -0.01
PPP1R3F-201ENST00000055335 LINC01620Q4KN68 170 aa15.01□□□□□ -0.01
PPP1R3F-201ENST00000055335 C15orf53Q8NAA6 179 aa15.01□□□□□ -0.01
PPP1R3F-201ENST00000055335 A8MZ25 164 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms