RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Prr23a3Q9CWP9 254 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Gprin2D3Z1D7 455 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Gstp2P46425 210 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Cacna1iE9Q7P2 2199 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Sc5dO88822 299 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 CxadrP97792 365 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 SnrpcQ62241 159 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 OstcQ78XF5 149 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 V1ra8Q9EQ48 279 aa12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Ckap5A2AGT5 2032 aaKnown RBP12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Zswim8Q3UHH1 1832 aaKnown RBP12.84□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Gm21616B6ZB74 166 aa12.83□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Nkx2-8O70584 235 aa12.83□□□□□ -0.35
Col2a1-201ENSMUST00000023123 Taf1Q80UV9 1891 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Rpl36-ps4A0A140T8U4 117 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Obp2bA2BHR0 176 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Ccl2P10148 148 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Cd200r1lQ6XJV6 249 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Olfr1382Q7TQT3 311 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Znrf1Q91V17 227 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 St6galnac6Q9JM95 333 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Dnase2bQ9QY48 354 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Igkv4-50A0A0B4J1J0 117 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Il12rb1Q60837 738 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 2200002J24RikQ9D807 110 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Tnfsf11O35235 316 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Gm10118Q8C8J5 116 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 RetnlgQ8K426 117 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Olfr976Q8VF15 326 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Ubtd1Q91WB7 227 aa12.83□□□□□ -0.36
Col2a1-201ENSMUST00000023123 H2-DMb2Q31099 261 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Gm10842Q3U587 122 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Tcf23Q9JLR5 209 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Neurl3Q8CJC5 254 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Errfi1Q99JZ7 461 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Necap2Q9D1J1 266 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Awat1A2ADU9 328 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Tmem171Q4KL18 322 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 B430218F22RikQ8BQR5 223 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Trav13n-4A0A0G2JG01 110 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Znf329Q6GQR8 522 aa12.82□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Zic3Q62521 466 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 RalyQ64012 312 aaKnown RBP12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Tmem177Q8BPE4 311 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Anapc13Q8R034 74 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Prelid3aQ8VE85 172 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 4930412O13RikQ9D5M9 106 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Pf4Q9Z126 105 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Ighv5-4A0A075B5P9 117 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Ighv5-16A0A0B4J1P4 117 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Prss46Q5M8S2 314 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Mrps36Q9CQX8 102 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Tmem50aQ9CXL1 157 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Bdp1Q571C7 2467 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 1700031F05RikB1AX30 191 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Dynlt3P56387 116 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Zfp72Q0VFY0 435 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Cep295Q8BQ48 2412 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Iglc3P01845 104 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 PpyP10601 100 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Gm11232Q5SPI8 295 aa12.81□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Mbnl3Q8R003 342 aaKnown RBP12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Olfr523Q8VFE7 317 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Atp5lQ9CPQ8 103 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Wdr82Q8BFQ4 313 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 LbhQ9CX60 105 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Trav6-1A0A075B5Z8 112 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Vamp8O70404 101 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Mpv17P19258 176 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Ccl11P48298 97 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Shisal1Q0VBP7 198 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Gm10283Q8C3L5 117 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Cabin1G3X8Q1 2187 aaKnown RBP12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Mex3bQ69Z36 601 aaKnown RBP12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Olfr1380Q7TQT5 311 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Wbp2nlQ9D529 359 aa12.8□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Gm44973A0A140LJJ1 189 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Gm14548E9Q1Z6 680 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 SprnQ8BWU1 147 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Opn3Q9WUK7 400 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 D930048N14RikA2AA67 225 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Zfp983E9PUT0 460 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Adamts17E9Q4D1 1122 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Otx1P80205 355 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Q8BTC1 67 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Nup37Q9CWU9 326 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Ighv1-15A0A0A6YXA5 117 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 P01634 136 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Fbln7Q501P1 440 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Znf474Q6V5K9 347 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Sfxn3Q91V61 321 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Igkv6-25A0A140T8N7 115 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Pax8Q00288 457 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Pilrb2Q2YFS1 225 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Olfr1419Q7TQS2 343 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Lamtor2Q9JHS3 125 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Slurp1Q9Z0K7 110 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Atad5Q4QY64 1826 aa12.79□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Gm45717A0A1B0GT68 152 aa12.78□□□□□ -0.36
Col2a1-201ENSMUST00000023123 Zfp977L7N2E7 438 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 62.3 ms