RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Rab7aP51150 207 aaKnown RBP9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Pcp4P63054 62 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Znf260Q62513 407 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Nabp2Q8R2Y9 212 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr495Q8VF12 330 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr1258Q8VGN6 311 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Dram1Q9DC58 238 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Jbts17Q8CE72 3214 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Igkv6-23A0A140T8N5 115 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 P01788 123 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 ApcsP12246 224 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Cd59bP58019 129 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Ypel2Q65Z95 119 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Zfp420Q7TMN8 578 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Znhit3Q9CQK1 151 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Lamp5Q9D387 280 aa9.93□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr1458A0A1L1SSD5 307 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Gm15292L7N231 93 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Ascl2O35885 263 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Rdh16O54909 317 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 C5ar1P30993 351 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Gm10384Q3UQ87 92 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr147Q60886 317 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr266Q8VFC3 316 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Znrf1Q91V17 227 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 EpcamQ99JW5 315 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Zfp976E9Q981 636 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Colca2F8VPY8 239 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Pax8Q00288 457 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Trav3-3Q5R1C3 114 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Msrb3Q8BU85 253 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Vmn1r222Q8R269 308 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 TslpQ9JIE6 140 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Lsm4Q9QXA5 137 aaKnown RBP9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Timm10bQ9WV96 100 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Ighv1-15A0A0A6YXA5 117 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Fcrl6A1YIY0 268 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Gm12830F6XVH0 157 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Sftpa1P35242 248 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Sult1a1P52840 291 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 MymxQ2Q5T5 84 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 NotoQ5TIS6 240 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Hapln4Q80WM4 400 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Mapk1ip1Q9D7G9 263 aa9.92□□□□□ -0.82
Rfx1-201ENSMUST00000005600 FrylF8VQ05 3007 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Wipf2Q6PEV3 440 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr25Q7TRD6 313 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr76Q8VFV2 317 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr1184Q8VG86 311 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Trav12d-3A0A075B6A4 115 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Trav7-4A0A075B6C1 113 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Trav7d-4Q5R1H9 113 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Usf1Q61069 310 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Ubald1Q6P3B2 176 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Klf17Q8CFA7 341 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr1265Q8VEZ3 309 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Q9D8L0 127 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr1179A2AUS6 307 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Gata2O09100 480 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Pdlim4P70271 330 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 RhodP97348 210 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 A230072I06RikQ3UUJ8 172 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Jpt2Q6PGH2 190 aaKnown RBP9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Necap1Q9CR95 275 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Pip4p2Q9CZX7 257 aa9.91□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr1369-ps1A0A140T8K7 317 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Znf385cA2A5E6 429 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Rnf212bD3Z423 297 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 P01789 122 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Ctsll3Q3ULP7 331 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Znf329Q6GQR8 522 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 OstcQ78XF5 149 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr1465Q7TQR2 307 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr263Q7TQT8 317 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr492Q8VFD1 314 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Fgfrl1Q91V87 529 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Ndufa2Q9CQ75 99 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 AplnrQ9WV08 377 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Ighv1-19A0A0A6YWX0 117 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Defa-rs12P50716 91 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Tctn2Q2MV57 700 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Cd200r3Q5UKY4 296 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr1441Q8VFV3 318 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Olfr262Q8VFV8 312 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Kiaa1549Q68FD9 1940 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Trav16A0A075B653 116 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Trav6d-3A0A075B6B3 112 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Rhox7bA6PW38 321 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Vmn1r119E9Q4H3 307 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 F7P70375 446 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 UngP97931 306 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Wfdc8Q4KUS1 273 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Trav6-3Q5R1E6 112 aa9.9□□□□□ -0.82
Rfx1-201ENSMUST00000005600 Lama1P19137 3084 aa9.9□□□□□ -0.83
Rfx1-201ENSMUST00000005600 Olfr251E9Q891 316 aa9.89□□□□□ -0.83
Rfx1-201ENSMUST00000005600 Ube2l3P68037 154 aaKnown RBP9.89□□□□□ -0.83
Rfx1-201ENSMUST00000005600 Q6DIA7 600 aa9.89□□□□□ -0.83
Rfx1-201ENSMUST00000005600 Cox19Q8K0C8 92 aa9.89□□□□□ -0.83
Rfx1-201ENSMUST00000005600 Vmn1r224E9PWK2 298 aa9.89□□□□□ -0.83
Rfx1-201ENSMUST00000005600 Cr2P19070 1025 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms