RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Rif1Q6PR54 2419 aaKnown RBP10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Gm9573F7C950 1606 aa10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Ighv5-4A0A075B5P9 117 aa10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Trbv12-2A0A0B4J1H1 124 aa10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Rhox7bA6PW38 321 aa10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Olfr1246Q7TQZ6 314 aa10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Olfr1181Q7TR18 311 aa10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Arl3Q9WUL7 182 aa10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Gm26920S4R2A5 56 aa10.66□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Ighv9-4A0A0A6YWH6 117 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Igkv6-14A0A140T8P1 115 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 P01787 123 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Rnase9P60154 184 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 H2al1nQ497L1 109 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Mrps18cQ8R2L5 143 aaKnown RBP10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Olfr1265Q8VEZ3 309 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Prr15Q9D1T5 122 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Rnd2Q9QYM5 227 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Fbln5Q9WVH9 448 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Igkv12-89A0A0G2JGW8 112 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Olfr1098A2AVB0 315 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Zfp456B2RUK9 458 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Fgf5P15656 264 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Hes7Q8BKT2 225 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Gm9945Q8BNZ3 91 aa10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Prr12E9PYL2 2035 aaKnown RBP10.65□□□□□ -0.7
Clcn3-201ENSMUST00000004430 Notch3Q61982 2318 aa10.65□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Trav23A0A0G2JG17 115 aa10.65□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm21882J3QN86 361 aa10.65□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Tnfaip6O08859 275 aa10.65□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm10842Q3U587 122 aa10.65□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ociad1Q9CRD0 247 aaKnown RBP10.65□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gab2Q9Z1S8 665 aa10.65□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Vmn1r119E9Q4H3 307 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm2381G3UY53 305 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Fam214bQ8BR27 538 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr961Q9EQ84 314 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Mnx1Q9QZW9 404 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Mpdu1Q9R0Q9 247 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Trbv26A0A0B4J1P5 115 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Igkv4-51A0N8I8 119 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Cldn34c3J3QJW5 233 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Zfp36P22893 319 aaKnown RBP10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Acrv1P50289 261 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr875Q7TRE5 310 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Spsb4Q8R5B6 273 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Tmem178aQ9CZ16 297 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Pcsk5Q04592 1877 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Dopey2Q3UHQ6 2295 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ighv7-3A0A075B5R2 120 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Lnp1A0A1B0GSK3 178 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm21789J3QMZ1 123 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Cldn34c2J3QNM1 233 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm21870J3QPN2 123 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gm21883J3QPV3 123 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ren2P00796 401 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Pdlim4P70271 330 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Cldn34c1Q8K193 234 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr476Q8VGI4 310 aa10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Rpl11Q9CXW4 178 aaKnown RBP10.64□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr715bE9Q725 315 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Atp5g2P56383 146 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Rpl8P62918 257 aaKnown RBP10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Smim12Q78RX3 92 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr1434Q7TQR9 312 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Rbm14Q8C2Q3 669 aaKnown RBP10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Scrt1Q99M85 348 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Awat1A2ADU9 328 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Psg18B2RSG7 476 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Timp3P39876 211 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 CiartQ3TQ03 375 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Cd52Q64389 74 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Tmem140Q8BGY5 185 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Ly96Q9JHF9 160 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Arhgap21Q6DFV3 1944 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Trav7-4A0A075B6C1 113 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Trav12d-1A0N8R0 115 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr779E9PUS9 130 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Lbhd2G3UW55 114 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Foxf2O54743 446 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 AsipQ03288 131 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Trav7d-4Q5R1H9 113 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Malsu1Q9CWV0 228 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Nav2E9Q842 2432 aa10.63□□□□□ -0.71
Clcn3-201ENSMUST00000004430 AponG3X9D6 251 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Rnase2bO35292 155 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 SeboxP70368 190 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Zcwpw2Q08EN7 125 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Duxbl2Q7TNE6 350 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 CrhQ8CIT0 187 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Rnf7Q9WTZ1 113 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Efnb3O35393 340 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 CxadrP97792 365 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 V1rd19Q3KNP5 305 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Smim15Q3UTD9 74 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Wdr83osQ6ZWX0 106 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr958Q8VEY3 312 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Olfr1012Q8VFJ7 311 aa10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Rbms1Q91W59 403 aaKnown RBP10.62□□□□□ -0.71
Clcn3-201ENSMUST00000004430 Gpa33Q9JKA5 319 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 111.1 ms