RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	RBMY1F	Q15415	496 aa	Known RBP	4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	SPANXN5	Q5MJ07	72 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	BTF3L4	Q96K17	158 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	KMT2A	Q03164	3969 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	DEFB131B	A0A096LNP1	70 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523		A0A1B0GXF2	115 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	C9orf170	A2RU37	121 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	FNDC10	F2Z333	226 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523		H0Y9J4	135 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	DUSP14	O95147	198 aa	Known RBP	4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	IFNA1	P01562	189 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF705D	P0CH99	300 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF705B	P0CI00	300 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	SPART-AS1	P0CW21	52 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	RPL7	P18124	248 aa	Known RBP	4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	TAS2R30	P59541	319 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	PSG9	Q00887	426 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	C14orf177	Q52M58	125 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	LINC00173	Q6ZV60	143 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	OR4B1	Q8NGF8	309 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	OR10G9	Q8NGN4	311 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	JPT2	Q9H910	190 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	DOK5	Q9P104	306 aa		4.38	□□□□□ -1.71
CASC19-238	ENST00000641523	IGKV1OR2-108	A0A075B7D4	117 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	TRAV8-6	A0A0B4J262	113 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523		A0A0J9YX75	114 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	NDUFAF8	A1L188	74 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF98	A6NK75	572 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	TSTD3	H0UI37	97 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523		H3BP45	60 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	TCAP	O15273	167 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	HYPM	O75409	117 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	DEDD	O75618	318 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	IL5	P05113	134 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	GIP	P09681	153 aa	Predicted RBP	4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	ORM2	P19652	201 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	CXCL3	P19876	107 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	REG3A	Q06141	175 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF846	Q147U1	533 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	RRN3P1	Q2M238	152 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	RPP25L	Q8N5L8	163 aa	Known RBP	4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	OR10P1	Q8NGE3	313 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	SLC25A22	Q9H936	323 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	PSENEN	Q9NZ42	101 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	APLN	Q9ULZ1	77 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523	HIGD1A	Q9Y241	93 aa		4.37	□□□□□ -1.71
CASC19-238	ENST00000641523		K7EPK0	472 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	SSSCA1	O60232	199 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	INS	P01308	110 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	PPBP	P02775	128 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	CXCL2	P19875	107 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	CTRL	P40313	264 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	C12orf74	Q32Q52	190 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	FAM78B	Q5VT40	261 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	GFI1B	Q5VTD9	330 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	CYP2G1P	Q6ZSU1	146 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	SMIM8	Q96KF7	97 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	IGF2BP2-AS1	Q96M15	143 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	SHANK2-AS3	Q9BTD1	123 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	GGACT	Q9BVM4	153 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	NPVF	Q9HCQ7	196 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	FRAS1	Q86XX4	4008 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	IGHV3-16	A0A0C4DH30	117 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523		A8MTW9	85 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523		H3BRN7	92 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	LINC00869	P0C866	280 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	EMP1	P54849	157 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	RAB5B	P61020	215 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	KIAA0087	Q14695	138 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	IAH1	Q2TAA2	248 aa	Predicted RBP	4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	GDF5OS	Q5U4N7	250 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	TEX43	Q6ZNM6	134 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	TMEM256	Q8N2U0	113 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF709	Q8N972	641 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	OR11H7	Q8NGC8	314 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	FMC1	Q96HJ9	113 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	KRTAP1-5	Q9BYS1	174 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	CELA1	Q9UNI1	258 aa		4.36	□□□□□ -1.71
CASC19-238	ENST00000641523	TRAV9-2	A0A087WT02	112 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	C8orf87	E5RJ46	101 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	NDUFS5	O43920	106 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	OR5G3	P0C626	314 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	LINC00614	P0C842	121 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	SCGB1A1	P11684	91 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	IL7	P13232	177 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	FAM222A	Q5U5X8	452 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	LCN15	Q6UWW0	184 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	TMEM14EP	Q6UXP3	125 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	POM121L12	Q8N7R1	296 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	SLC50A1	Q9BRV3	221 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	SCRT1	Q9BWW7	348 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	BIN3	Q9NQY0	253 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	GSKIP	Q9P0R6	139 aa		4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.35	□□□□□ -1.71
CASC19-238	ENST00000641523	DNAH6	Q9C0G6	4158 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms