RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 NEGR1Q7Z3B1 354 aa9.62□□□□□ -0.87
TCF4-289ENST00000637941 HIST1H4GQ99525 98 aa9.62□□□□□ -0.87
TCF4-289ENST00000637941 NAA38Q9BRA0 125 aaKnown RBP9.62□□□□□ -0.87
TCF4-289ENST00000637941 TTTY13Q9BZ97 58 aa9.62□□□□□ -0.87
TCF4-289ENST00000637941 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
TCF4-289ENST00000637941 IGHV4-38-2P0DP08 117 aa9.61□□□□□ -0.87
TCF4-289ENST00000637941 PAPPA-AS1Q5QFB9 102 aa9.61□□□□□ -0.87
TCF4-289ENST00000637941 FAM159AQ6UWV7 190 aa9.61□□□□□ -0.87
TCF4-289ENST00000637941 PHLDA1Q8WV24 401 aaPredicted RBP9.61□□□□□ -0.87
TCF4-289ENST00000637941 RPL39LQ96EH5 51 aaKnown RBP9.61□□□□□ -0.87
TCF4-289ENST00000637941 IGHV4OR15-8A0A075B7B6 117 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 A0A087WW49 117 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 KLLNB2CW77 178 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 G3V4G9 280 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 MSMBP08118 114 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 RNASE3P12724 160 aaKnown RBP9.6□□□□□ -0.87
TCF4-289ENST00000637941 MAPKAPK5-AS1Q8N8E1 139 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 BAALCQ8WXS3 180 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 KLK15Q9H2R5 256 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 CYSLTR1Q9Y271 337 aa9.6□□□□□ -0.87
TCF4-289ENST00000637941 E9PLD3 99 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 ODF3Q96PU9 254 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 CSTL1Q9H114 145 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 GNRH2O43555 120 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 GATA3P23771 443 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 ATP5J2P56134 94 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 HERVK_113P61574 105 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 SCGB2A2Q13296 93 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 MED13LQ71F56 2210 aa9.59□□□□□ -0.87
TCF4-289ENST00000637941 TMEM89A2RUT3 159 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 IGLL5B9A064 214 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 F6UB75 175 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 C12orf74Q32Q52 190 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 ZNF479Q96JC4 524 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 TMEM238LA0A1B0GVL6 79 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 A6NJY4 79 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 RNF223E7ERA6 249 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 K7ERJ3 54 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 SAP30O75446 220 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 CFHR3Q02985 330 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 KIR2DL4Q99706 377 aa9.58□□□□□ -0.88
TCF4-289ENST00000637941 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
TCF4-289ENST00000637941 TRBV7-3A0A075B6L6 115 aa9.57□□□□□ -0.88
TCF4-289ENST00000637941 B4DSR2 109 aa9.57□□□□□ -0.88
TCF4-289ENST00000637941 F8W1H4 67 aa9.57□□□□□ -0.88
TCF4-289ENST00000637941 VCYO14598 125 aa9.57□□□□□ -0.88
TCF4-289ENST00000637941 DSCR9P59020 149 aa9.57□□□□□ -0.88
TCF4-289ENST00000637941 BLCAPP62952 87 aa9.57□□□□□ -0.88
TCF4-289ENST00000637941 ABCA2Q9BZC7 2435 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 PRSS29PA6NIE9 313 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 FOXI2Q6ZQN5 318 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 SYT8Q8NBV8 401 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 KIF25-AS1Q9Y6Z4 181 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 PRB1P04280 392 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 DEFB1P60022 68 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 SNRPD3P62318 126 aaKnown RBP9.56□□□□□ -0.88
TCF4-289ENST00000637941 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 PRADC1Q9BSG0 188 aa9.56□□□□□ -0.88
TCF4-289ENST00000637941 TIMM17AQ99595 171 aa9.55□□□□□ -0.88
TCF4-289ENST00000637941 CACNA1BQ00975 2339 aa9.55□□□□□ -0.88
TCF4-289ENST00000637941 IGHV4-30-2A0A087WSY4 118 aa9.55□□□□□ -0.88
TCF4-289ENST00000637941 J3QR89 54 aa9.55□□□□□ -0.88
TCF4-289ENST00000637941 LGALS1P09382 135 aaKnown RBP9.55□□□□□ -0.88
TCF4-289ENST00000637941 CD7P09564 240 aa9.55□□□□□ -0.88
TCF4-289ENST00000637941 POLR2KP53803 58 aaKnown RBP9.55□□□□□ -0.88
TCF4-289ENST00000637941 PMVKQ15126 192 aa9.55□□□□□ -0.88
TCF4-289ENST00000637941 RRN3P1Q2M238 152 aa9.55□□□□□ -0.88
TCF4-289ENST00000637941 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 ZNF815PA8K554 130 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 LGALS9O00182 355 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 SPRY2O43597 315 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 LINC00315P59091 139 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 SUMO4Q6EEV6 95 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 SCGB1D4Q6XE38 83 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 BBC3Q96PG8 261 aaPredicted RBP9.54□□□□□ -0.88
TCF4-289ENST00000637941 TP53TG1Q9Y2A0 90 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 ACACBO00763 2458 aa9.54□□□□□ -0.88
TCF4-289ENST00000637941 F5H697 171 aa9.53□□□□□ -0.88
TCF4-289ENST00000637941 HOXA3O43365 443 aaPredicted RBP9.53□□□□□ -0.88
TCF4-289ENST00000637941 PSMB8P28062 276 aa9.53□□□□□ -0.88
TCF4-289ENST00000637941 RIPPLY3P57055 190 aa9.53□□□□□ -0.88
TCF4-289ENST00000637941 DUSP14O95147 198 aaKnown RBP9.53□□□□□ -0.88
TCF4-289ENST00000637941 RPL24P83731 157 aaKnown RBP9.53□□□□□ -0.88
TCF4-289ENST00000637941 LCNL1Q6ZST4 164 aa9.53□□□□□ -0.88
TCF4-289ENST00000637941 C9orf85Q96MD7 179 aa9.53□□□□□ -0.88
TCF4-289ENST00000637941 TRAV12-3A0A0B4J271 114 aa9.52□□□□□ -0.89
TCF4-289ENST00000637941 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
TCF4-289ENST00000637941 IGIPA6NJ69 53 aa9.52□□□□□ -0.89
TCF4-289ENST00000637941 SRD5A1P18405 259 aa9.52□□□□□ -0.89
TCF4-289ENST00000637941 Q6ZS46 218 aa9.52□□□□□ -0.89
TCF4-289ENST00000637941 RHOHQ15669 191 aa9.52□□□□□ -0.89
TCF4-289ENST00000637941 LYRM7Q5U5X0 104 aa9.52□□□□□ -0.89
TCF4-289ENST00000637941 MUC4Q99102 2169 aa9.51□□□□□ -0.89
TCF4-289ENST00000637941 A0A0J9YX75 114 aa9.51□□□□□ -0.89
TCF4-289ENST00000637941 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
TCF4-289ENST00000637941 C11orf86A6NJI1 115 aa9.51□□□□□ -0.89
TCF4-289ENST00000637941 COX6B1P14854 86 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms