RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 A0A1B0GUT8 65 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 A0A1B0GW15 77 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 SCO1O75880 301 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 ZNF415Q09FC8 603 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 RIGQ13278 110 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 DEFB135Q30KP9 77 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 ATP5L2Q7Z4Y8 100 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 C11orf72Q8NBR9 251 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 RNASE8Q8TDE3 154 aaKnown RBP9.67□□□□□ -0.86
LINC00643-207ENST00000637212 C16orf74Q96GX8 76 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 TPPP3Q9BW30 176 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 URGCP-MRPS24S4R325 110 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 X6R8D5 127 aa9.67□□□□□ -0.86
LINC00643-207ENST00000637212 H3BVH4 76 aa9.66□□□□□ -0.86
LINC00643-207ENST00000637212 MIFP14174 115 aa9.66□□□□□ -0.86
LINC00643-207ENST00000637212 DAZ2Q13117 558 aaKnown RBP9.66□□□□□ -0.86
LINC00643-207ENST00000637212 RASL11AQ6T310 242 aa9.66□□□□□ -0.86
LINC00643-207ENST00000637212 OR11H2Q8NH07 326 aa9.66□□□□□ -0.86
LINC00643-207ENST00000637212 OVOL2Q9BRP0 275 aa9.66□□□□□ -0.86
LINC00643-207ENST00000637212 NDUFAF3Q9BU61 184 aa9.66□□□□□ -0.86
LINC00643-207ENST00000637212 GSN-AS1Q9NRJ2 163 aa9.66□□□□□ -0.86
LINC00643-207ENST00000637212 PHLDA3Q9Y5J5 127 aa9.66□□□□□ -0.86
LINC00643-207ENST00000637212 PRM2P04554 102 aa9.65□□□□□ -0.86
LINC00643-207ENST00000637212 S100A8P05109 93 aa9.65□□□□□ -0.86
LINC00643-207ENST00000637212 COX19Q49B96 90 aa9.65□□□□□ -0.86
LINC00643-207ENST00000637212 SPANXN1Q5VSR9 72 aa9.65□□□□□ -0.86
LINC00643-207ENST00000637212 SBSPONQ8IVN8 264 aa9.65□□□□□ -0.86
LINC00643-207ENST00000637212 SYT8Q8NBV8 401 aa9.65□□□□□ -0.86
LINC00643-207ENST00000637212 COLCA2A8K830 154 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 SNURFLB1AK76 121 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 M0R2P5 195 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 NXPH4O95158 308 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 NTF3P20783 257 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 LGALS9BQ3B8N2 356 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 ZFP82Q8N141 532 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 IL17DQ8TAD2 202 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 MRAPQ8TCY5 172 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 FAM210BQ96KR6 192 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
LINC00643-207ENST00000637212 TGP01266 2768 aa9.64□□□□□ -0.87
LINC00643-207ENST00000637212 TGIF2-C20orf24A0A0A6YYL0 155 aa9.63□□□□□ -0.87
LINC00643-207ENST00000637212 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
LINC00643-207ENST00000637212 TWIST1Q15672 202 aa9.63□□□□□ -0.87
LINC00643-207ENST00000637212 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
LINC00643-207ENST00000637212 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
LINC00643-207ENST00000637212 RASL10AQ92737 203 aa9.63□□□□□ -0.87
LINC00643-207ENST00000637212 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
LINC00643-207ENST00000637212 TM2D3Q9BRN9 247 aa9.63□□□□□ -0.87
LINC00643-207ENST00000637212 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
LINC00643-207ENST00000637212 SPINK4O60575 86 aa9.62□□□□□ -0.87
LINC00643-207ENST00000637212 HBBP68871 147 aa9.62□□□□□ -0.87
LINC00643-207ENST00000637212 ZNF876PQ49A33 203 aa9.62□□□□□ -0.87
LINC00643-207ENST00000637212 MRPL54Q6P161 138 aaKnown RBP9.62□□□□□ -0.87
LINC00643-207ENST00000637212 GATD1Q8NB37 220 aa9.62□□□□□ -0.87
LINC00643-207ENST00000637212 GNB1LQ9BYB4 327 aa9.62□□□□□ -0.87
LINC00643-207ENST00000637212 MUC21A0A0G2JKD1 596 aa9.61□□□□□ -0.87
LINC00643-207ENST00000637212 MUC21A0A140T8X8 626 aa9.61□□□□□ -0.87
LINC00643-207ENST00000637212 SMIM15Q7Z3B0 74 aa9.61□□□□□ -0.87
LINC00643-207ENST00000637212 Q8NAQ8 132 aa9.61□□□□□ -0.87
LINC00643-207ENST00000637212 B9D2Q9BPU9 175 aa9.61□□□□□ -0.87
LINC00643-207ENST00000637212 NOP10Q9NPE3 64 aaKnown RBP9.61□□□□□ -0.87
LINC00643-207ENST00000637212 NOTCH1P46531 2555 aa9.6□□□□□ -0.87
LINC00643-207ENST00000637212 IGHV4-28A0A0C4DH34 117 aa9.6□□□□□ -0.87
LINC00643-207ENST00000637212 M0R381 172 aa9.6□□□□□ -0.87
LINC00643-207ENST00000637212 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
LINC00643-207ENST00000637212 CAMPP49913 170 aa9.6□□□□□ -0.87
LINC00643-207ENST00000637212 TMEM191AQ9H0A3 160 aa9.6□□□□□ -0.87
LINC00643-207ENST00000637212 ZMAT4Q9H898 229 aa9.6□□□□□ -0.87
LINC00643-207ENST00000637212 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
LINC00643-207ENST00000637212 LYRM9A8MSI8 78 aa9.59□□□□□ -0.87
LINC00643-207ENST00000637212 A8MWV9 139 aa9.59□□□□□ -0.87
LINC00643-207ENST00000637212 CIDEAO60543 219 aa9.59□□□□□ -0.87
LINC00643-207ENST00000637212 MT-ND6P03923 174 aa9.59□□□□□ -0.87
LINC00643-207ENST00000637212 NHLRC4P0CG21 123 aaPredicted RBP9.59□□□□□ -0.87
LINC00643-207ENST00000637212 RAB5AP20339 215 aa9.59□□□□□ -0.87
LINC00643-207ENST00000637212 SSTP61278 116 aa9.59□□□□□ -0.87
LINC00643-207ENST00000637212 DEFA6Q01524 100 aa9.59□□□□□ -0.87
LINC00643-207ENST00000637212 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.87
LINC00643-207ENST00000637212 TRGV1A0A0A0MS02 117 aa9.58□□□□□ -0.88
LINC00643-207ENST00000637212 TEX48A0A1B0GUV7 120 aa9.58□□□□□ -0.88
LINC00643-207ENST00000637212 EMP1P54849 157 aa9.58□□□□□ -0.88
LINC00643-207ENST00000637212 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
LINC00643-207ENST00000637212 C18orf15Q96N68 181 aa9.58□□□□□ -0.88
LINC00643-207ENST00000637212 RS1O15537 224 aa9.57□□□□□ -0.88
LINC00643-207ENST00000637212 HLA-DQA1P01909 254 aa9.57□□□□□ -0.88
LINC00643-207ENST00000637212 SPART-AS1P0CW21 52 aa9.57□□□□□ -0.88
LINC00643-207ENST00000637212 RAB4BP61018 213 aa9.57□□□□□ -0.88
LINC00643-207ENST00000637212 FRZBQ92765 325 aa9.57□□□□□ -0.88
LINC00643-207ENST00000637212 AP1S3Q96PC3 154 aa9.57□□□□□ -0.88
LINC00643-207ENST00000637212 C11orf68Q9H3H3 251 aaKnown RBP9.57□□□□□ -0.88
LINC00643-207ENST00000637212 RETNQ9HD89 108 aa9.57□□□□□ -0.88
LINC00643-207ENST00000637212 MRPL16Q9NX20 251 aaKnown RBP9.57□□□□□ -0.88
LINC00643-207ENST00000637212 KIF25-AS1Q9Y6Z4 181 aa9.57□□□□□ -0.88
LINC00643-207ENST00000637212 CRYGDP07320 174 aa9.56□□□□□ -0.88
LINC00643-207ENST00000637212 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
LINC00643-207ENST00000637212 EVI2AP22794 236 aa9.56□□□□□ -0.88
LINC00643-207ENST00000637212 RPS10P46783 165 aaKnown RBP9.56□□□□□ -0.88
LINC00643-207ENST00000637212 FAM104BQ5XKR9 115 aa9.56□□□□□ -0.88
LINC00643-207ENST00000637212 ZFP2Q6ZN57 461 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms