RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 NXPH4O95158 308 aa11.01□□□□□ -0.65
CLN6-215ENST00000636674 PPP1R17O96001 155 aa11.01□□□□□ -0.65
CLN6-215ENST00000636674 UNQ9165/PRO28630Q6UXU0 137 aa11.01□□□□□ -0.65
CLN6-215ENST00000636674 TMEM219Q86XT9 240 aa11.01□□□□□ -0.65
CLN6-215ENST00000636674 OR11H1Q8NG94 326 aa11.01□□□□□ -0.65
CLN6-215ENST00000636674 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
CLN6-215ENST00000636674 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
CLN6-215ENST00000636674 SELENOKQ9Y6D0 94 aa11.01□□□□□ -0.65
CLN6-215ENST00000636674 ASH1LQ9NR48 2969 aaKnown RBP11□□□□□ -0.65
CLN6-215ENST00000636674 C12orf74Q32Q52 190 aa11□□□□□ -0.65
CLN6-215ENST00000636674 FOXI2Q6ZQN5 318 aa11□□□□□ -0.65
CLN6-215ENST00000636674 FLNBO75369 2602 aaKnown RBP10.99□□□□□ -0.65
CLN6-215ENST00000636674 MYMXA0A1B0GTQ4 84 aa10.99□□□□□ -0.65
CLN6-215ENST00000636674 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
CLN6-215ENST00000636674 RPL32P62910 135 aaKnown RBP10.99□□□□□ -0.65
CLN6-215ENST00000636674 USMG5Q96IX5 58 aa10.99□□□□□ -0.65
CLN6-215ENST00000636674 ZNF479Q96JC4 524 aa10.99□□□□□ -0.65
CLN6-215ENST00000636674 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
CLN6-215ENST00000636674 IGHV1-69DA0A0B4J2H0 117 aa10.99□□□□□ -0.65
CLN6-215ENST00000636674 IGHV1-69P01742 117 aa10.99□□□□□ -0.65
CLN6-215ENST00000636674 RIPPLY3P57055 190 aa10.99□□□□□ -0.65
CLN6-215ENST00000636674 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
CLN6-215ENST00000636674 F8W1H4 67 aa10.98□□□□□ -0.65
CLN6-215ENST00000636674 TRBV12-3P01733 135 aa10.98□□□□□ -0.65
CLN6-215ENST00000636674 C2orf66Q6UXQ4 117 aa10.98□□□□□ -0.65
CLN6-215ENST00000636674 BAALCQ8WXS3 180 aa10.98□□□□□ -0.65
CLN6-215ENST00000636674 RPL39LQ96EH5 51 aaKnown RBP10.98□□□□□ -0.65
CLN6-215ENST00000636674 HIST1H4GQ99525 98 aa10.98□□□□□ -0.65
CLN6-215ENST00000636674 HECTD1Q9ULT8 2610 aa10.98□□□□□ -0.65
CLN6-215ENST00000636674 AGRNO00468 2067 aa10.98□□□□□ -0.65
CLN6-215ENST00000636674 MED13LQ71F56 2210 aa10.98□□□□□ -0.65
CLN6-215ENST00000636674 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
CLN6-215ENST00000636674 RNASE3P12724 160 aaKnown RBP10.97□□□□□ -0.65
CLN6-215ENST00000636674 C14orf178Q8N769 122 aaPredicted RBP10.97□□□□□ -0.65
CLN6-215ENST00000636674 TEX48A0A1B0GUV7 120 aa10.97□□□□□ -0.65
CLN6-215ENST00000636674 RRN3P1Q2M238 152 aa10.97□□□□□ -0.65
CLN6-215ENST00000636674 LINC00527Q9UJ94 153 aa10.97□□□□□ -0.65
CLN6-215ENST00000636674 COL12A1Q99715 3063 aa10.96□□□□□ -0.65
CLN6-215ENST00000636674 IGHG2P01859 326 aa10.96□□□□□ -0.65
CLN6-215ENST00000636674 ABCA2Q9BZC7 2435 aa10.96□□□□□ -0.66
CLN6-215ENST00000636674 IGHV4OR15-8A0A075B7B6 117 aa10.96□□□□□ -0.66
CLN6-215ENST00000636674 A0A087WW49 117 aa10.96□□□□□ -0.66
CLN6-215ENST00000636674 J3KRW8 73 aa10.96□□□□□ -0.66
CLN6-215ENST00000636674 LGALS1P09382 135 aaKnown RBP10.96□□□□□ -0.66
CLN6-215ENST00000636674 KIF25-AS1Q9Y6Z4 181 aa10.96□□□□□ -0.66
CLN6-215ENST00000636674 KLK15Q9H2R5 256 aa10.95□□□□□ -0.66
CLN6-215ENST00000636674 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
CLN6-215ENST00000636674 KLLNB2CW77 178 aa10.94□□□□□ -0.66
CLN6-215ENST00000636674 MGPP08493 103 aa10.94□□□□□ -0.66
CLN6-215ENST00000636674 LINC00315P59091 139 aa10.94□□□□□ -0.66
CLN6-215ENST00000636674 SPANXB1Q9NS25 103 aaPredicted RBP10.94□□□□□ -0.66
CLN6-215ENST00000636674 COX6B1P14854 86 aa10.94□□□□□ -0.66
CLN6-215ENST00000636674 RNASE4P34096 147 aaKnown RBP10.94□□□□□ -0.66
CLN6-215ENST00000636674 RPL24P83731 157 aaKnown RBP10.94□□□□□ -0.66
CLN6-215ENST00000636674 PRADC1Q9BSG0 188 aa10.94□□□□□ -0.66
CLN6-215ENST00000636674 IGHV4-39P01824 125 aa10.93□□□□□ -0.66
CLN6-215ENST00000636674 DEFB1P60022 68 aa10.93□□□□□ -0.66
CLN6-215ENST00000636674 SAMD13Q5VXD3 122 aa10.93□□□□□ -0.66
CLN6-215ENST00000636674 SVIPQ8NHG7 77 aa10.93□□□□□ -0.66
CLN6-215ENST00000636674 SETXQ7Z333 2677 aaKnown RBP10.93□□□□□ -0.66
CLN6-215ENST00000636674 A6NDX4 124 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 GNRH2O43555 120 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 SPRY2O43597 315 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 CYSLTR1Q9Y271 337 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 IGHV3OR16-10A0A075B7F0 116 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 TMEM238C9JI98 176 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 F6UB75 175 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 UTP20O75691 2785 aaKnown RBP10.92□□□□□ -0.66
CLN6-215ENST00000636674 IGLV1-40P01703 118 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 BRD3OSQ6XYD6 125 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 MUC4Q99102 2169 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 RHPN1-AS1Q9BWJ2 59 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 DAZ1Q9NQZ3 744 aaKnown RBP10.92□□□□□ -0.66
CLN6-215ENST00000636674 PRO0461Q9UI25 63 aa10.92□□□□□ -0.66
CLN6-215ENST00000636674 TMEM238LA0A1B0GVL6 79 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 A6NJY4 79 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 J3QR89 54 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 CRYGDP07320 174 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 POLR2KP53803 58 aaKnown RBP10.91□□□□□ -0.66
CLN6-215ENST00000636674 MORN3Q6PF18 240 aaPredicted RBP10.91□□□□□ -0.66
CLN6-215ENST00000636674 IGIPA6NJ69 53 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 H3BMG7 143 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 K7EMT4 169 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 WFDC2Q14508 124 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 ZNF580Q9UK33 172 aa10.91□□□□□ -0.66
CLN6-215ENST00000636674 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.66
CLN6-215ENST00000636674 ZNF815PA8K554 130 aa10.9□□□□□ -0.66
CLN6-215ENST00000636674 DUSP14O95147 198 aaKnown RBP10.9□□□□□ -0.66
CLN6-215ENST00000636674 TSHBP01222 138 aa10.9□□□□□ -0.66
CLN6-215ENST00000636674 IGHV3-11P01762 117 aa10.9□□□□□ -0.66
CLN6-215ENST00000636674 UBE2D1P51668 147 aa10.9□□□□□ -0.66
CLN6-215ENST00000636674 TMEM141Q96I45 108 aa10.9□□□□□ -0.66
CLN6-215ENST00000636674 TIMM17AQ99595 171 aa10.9□□□□□ -0.66
CLN6-215ENST00000636674 HOXA3O43365 443 aaPredicted RBP10.89□□□□□ -0.67
CLN6-215ENST00000636674 PF4V1P10720 104 aa10.89□□□□□ -0.67
CLN6-215ENST00000636674 RPL11P62913 178 aaKnown RBP10.89□□□□□ -0.67
CLN6-215ENST00000636674 CFHR3Q02985 330 aa10.89□□□□□ -0.67
CLN6-215ENST00000636674 ZFP2Q6ZN57 461 aa10.89□□□□□ -0.67
CLN6-215ENST00000636674 ODF3Q96PU9 254 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms