RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 IGKV1-5P01602 117 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 LINC00205P59089 165 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 FGF12P61328 243 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 IGLV3-21P80748 117 aaPredicted RBP2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 CRIP3Q6Q6R5 217 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 FAM30AQ9NZY2 134 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 TCF20Q9UGU0 1960 aaKnown RBP2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 TRBV10-2A0A0K0K1G8 114 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 M0R135 149 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 CCKP06307 115 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 PVRIGQ6DKI7 326 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 SBSPONQ8IVN8 264 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 FAM223AQ8IWN6 122 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 UBALD1Q8TB05 177 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 ZNF747Q9BV97 191 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 IGHV1OR21-1A0A087WYE8 117 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 IGKV1D-43A0A0B4J1Z2 117 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 PMS2P5A8MQ11 134 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 EIF4EBP3O60516 100 aaPredicted RBP2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 ORMDL3Q8N138 153 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 Q9HAA7 133 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 CELA1Q9UNI1 258 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 SHANK1Q9Y566 2161 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 C2orf16Q68DN1 1984 aa2.99□□□□□ -1.93
R3HDM1-220ENST00000628915 TRBV6-6A0A0A6YYG2 114 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 HIGD1CA8MV81 97 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 ZFP2Q6ZN57 461 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 ZNF843Q8N446 348 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 RPRMLQ8N4K4 120 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 PLCE1Q9P212 2302 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 DNAH7Q8WXX0 4024 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 PCNX3Q9H6A9 2034 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 IGKV3D-7A0A0C4DH55 119 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 TMEM30CPA0ZSE6 113 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 EPOPA6NHQ4 379 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 IGKV1-39P01597 117 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 IGKV1D-39P04432 117 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 EBI3Q14213 229 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 PLGLAQ15195 96 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 RHOHQ15669 191 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 FAM53AQ6NSI3 398 aaPredicted RBP2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 UNQ9165/PRO28630Q6UXU0 137 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 SCXQ7RTU7 201 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 SPATA3Q8NHX4 192 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 ZNF355PQ9NSJ1 428 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 LINC00474Q9P2X8 69 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 DSPP15924 2871 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 DNHD1Q96M86 4753 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 CREBBPQ92793 2442 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 ZNF80P51504 273 aaPredicted RBP2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 C7orf65Q6ZTY9 151 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 URB1-AS1Q96HZ7 61 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 PRO1854Q9UHT4 67 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 EML6Q6ZMW3 1958 aa2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 ARHGEF17Q96PE2 2063 aaPredicted RBP2.98□□□□□ -1.93
R3HDM1-220ENST00000628915 PRM2P04554 102 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 EGR2P11161 476 aaPredicted RBP2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 XCL1P47992 114 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 BSPH1Q075Z2 132 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 FAM216BQ8N7L0 139 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 TM2D3Q9BRN9 247 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 UPK3BQ9BT76 320 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 GFRA4Q9GZZ7 299 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 XCL2Q9UBD3 114 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 ARHGAP32A7KAX9 2087 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 SEC16AO15027 2179 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 IGHV5-10-1A0A0J9YXX1 117 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 ZNF883P0CG24 379 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 DEFA4P12838 97 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 Q6P435 159 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 CXCL17Q6UXB2 119 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 C6orf223Q8N319 242 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 THADAQ6YHU6 1953 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 COL27A1Q8IZC6 1860 aaPredicted RBP2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 F8WEM9 126 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 CISD3P0C7P0 127 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 RIGQ13278 110 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 LY6G5CQ5SRR4 150 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 GDF5OSQ5U4N7 250 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 FGF22Q9HCT0 170 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 IGKV1-12A0A0C4DH73 117 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 IGKV1D-12P01611 117 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 IGLV2-8P01709 118 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 LINC00271P0C7V0 271 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 ESRGQ1W209 222 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 C10orf128Q5T292 105 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 NRACQ8N912 160 aa2.97□□□□□ -1.93
R3HDM1-220ENST00000628915 FRAS1Q86XX4 4008 aa2.96□□□□□ -1.93
R3HDM1-220ENST00000628915 IGKV1-27A0A075B6S5 117 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 TRAV12-3A0A0B4J271 114 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 H0Y9J4 135 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 BUB1B-PAK6H3BSN5 160 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 CHKB-CPT1BH3BT56 60 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 FOXL2NBQ6ZUU3 175 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 Q8N7P7 452 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 TMEM190Q8WZ59 177 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 RPP21Q9H633 154 aaKnown RBP2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 IGKV1-6A0A0C4DH72 117 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 LOC100131303A0A0U1RQF7 123 aa2.96□□□□□ -1.94
R3HDM1-220ENST00000628915 PSPHP1O15172 72 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms