RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 CACNG7P62955 275 aa7.73□□□□□ -1.17
CPNE3-212ENST00000621783 COX19Q49B96 90 aa7.73□□□□□ -1.17
CPNE3-212ENST00000621783 KPRPQ5T749 579 aaPredicted RBP7.73□□□□□ -1.17
CPNE3-212ENST00000621783 WDR73Q6P4I2 378 aa7.73□□□□□ -1.17
CPNE3-212ENST00000621783 ZNF705AQ6ZN79 300 aaPredicted RBP7.73□□□□□ -1.17
CPNE3-212ENST00000621783 GATD1Q8NB37 220 aa7.73□□□□□ -1.17
CPNE3-212ENST00000621783 GNB1LQ9BYB4 327 aa7.73□□□□□ -1.17
CPNE3-212ENST00000621783 PHLDA3Q9Y5J5 127 aa7.73□□□□□ -1.17
CPNE3-212ENST00000621783 TRRAPQ9Y4A5 3859 aa7.73□□□□□ -1.17
CPNE3-212ENST00000621783 IGHV4-4A0A075B6R2 117 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 A0A1B0GW15 77 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 A8MZ25 164 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 M0R381 172 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 NXPH4O95158 308 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 HLA-DQA1P01909 254 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 MT-ND6P03923 174 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 S100A8P05109 93 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 NTF3P20783 257 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 RAB4BP61018 213 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 TWIST1Q15672 202 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 SPANXN1Q5VSR9 72 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 C11orf72Q8NBR9 251 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 MSRB1Q9NZV6 116 aa7.72□□□□□ -1.17
CPNE3-212ENST00000621783 COL6A5A8TX70 2615 aa7.71□□□□□ -1.17
CPNE3-212ENST00000621783 TRGC2P03986 189 aa7.71□□□□□ -1.18
CPNE3-212ENST00000621783 AZU1P20160 251 aa7.71□□□□□ -1.18
CPNE3-212ENST00000621783 ZFP82Q8N141 532 aa7.71□□□□□ -1.18
CPNE3-212ENST00000621783 IL17DQ8TAD2 202 aa7.71□□□□□ -1.18
CPNE3-212ENST00000621783 RNASE8Q8TDE3 154 aaKnown RBP7.71□□□□□ -1.18
CPNE3-212ENST00000621783 FRZBQ92765 325 aa7.71□□□□□ -1.18
CPNE3-212ENST00000621783 MRPL18Q9H0U6 180 aaKnown RBP7.71□□□□□ -1.18
CPNE3-212ENST00000621783 GSN-AS1Q9NRJ2 163 aa7.71□□□□□ -1.18
CPNE3-212ENST00000621783 TRAPPC1Q9Y5R8 145 aa7.71□□□□□ -1.18
CPNE3-212ENST00000621783 UBE2CO00762 179 aa7.7□□□□□ -1.18
CPNE3-212ENST00000621783 PHOX2AO14813 284 aa7.7□□□□□ -1.18
CPNE3-212ENST00000621783 FABP9Q0Z7S8 132 aa7.7□□□□□ -1.18
CPNE3-212ENST00000621783 SLAQ13239 276 aa7.7□□□□□ -1.18
CPNE3-212ENST00000621783 DEFB135Q30KP9 77 aa7.7□□□□□ -1.18
CPNE3-212ENST00000621783 ZNF493Q6ZR52 646 aa7.7□□□□□ -1.18
CPNE3-212ENST00000621783 TMEM263Q8WUH6 116 aaKnown RBP7.7□□□□□ -1.18
CPNE3-212ENST00000621783 PGPEP1Q9NXJ5 209 aa7.7□□□□□ -1.18
CPNE3-212ENST00000621783 TMA7Q9Y2S6 64 aaKnown RBP7.7□□□□□ -1.18
CPNE3-212ENST00000621783 CMYA5Q8N3K9 4069 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 C1orf196B1AJZ1 125 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 PRB2P02812 416 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-212ENST00000621783 TRGC1P0CF51 173 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 RRN3P1Q2M238 152 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 SYT8Q8NBV8 401 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 C16orf74Q96GX8 76 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 TMEM191AQ9H0A3 160 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 X6R8D5 127 aa7.69□□□□□ -1.18
CPNE3-212ENST00000621783 PLAC8L1A1L4L8 177 aa7.68□□□□□ -1.18
CPNE3-212ENST00000621783 K7EIL1 84 aa7.68□□□□□ -1.18
CPNE3-212ENST00000621783 M0R2P5 195 aa7.68□□□□□ -1.18
CPNE3-212ENST00000621783 APCSP02743 223 aa7.68□□□□□ -1.18
CPNE3-212ENST00000621783 SMIM15Q7Z3B0 74 aa7.68□□□□□ -1.18
CPNE3-212ENST00000621783 AMN1Q8IY45 258 aa7.68□□□□□ -1.18
CPNE3-212ENST00000621783 SPXQ9BT56 116 aa7.68□□□□□ -1.18
CPNE3-212ENST00000621783 NOTCH3Q9UM47 2321 aa7.68□□□□□ -1.18
CPNE3-212ENST00000621783 EVI2AP22794 236 aa7.67□□□□□ -1.18
CPNE3-212ENST00000621783 RAB5BP61020 215 aa7.67□□□□□ -1.18
CPNE3-212ENST00000621783 KIAA1644Q3SXP7 199 aa7.67□□□□□ -1.18
CPNE3-212ENST00000621783 FAM104BQ5XKR9 115 aa7.67□□□□□ -1.18
CPNE3-212ENST00000621783 Q6ZWC4 215 aa7.67□□□□□ -1.18
CPNE3-212ENST00000621783 PTH2Q96A98 100 aa7.67□□□□□ -1.18
CPNE3-212ENST00000621783 RNF183Q96D59 192 aa7.67□□□□□ -1.18
CPNE3-212ENST00000621783 RNF185Q96GF1 192 aa7.67□□□□□ -1.18
CPNE3-212ENST00000621783 MRPL16Q9NX20 251 aaKnown RBP7.67□□□□□ -1.18
CPNE3-212ENST00000621783 MUC4Q99102 2169 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 SMIM9A6NGZ8 99 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BKO60814 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BJP06899 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BOP23527 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BBP33778 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BDP58876 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BCP62807 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 DAZ2Q13117 558 aaKnown RBP7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST2H2BEQ16778 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 ZNF876PQ49A33 203 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-212ENST00000621783 C14orf178Q8N769 122 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-212ENST00000621783 OR11H2Q8NH07 326 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BHQ93079 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BNQ99877 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 HIST1H2BMQ99879 126 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 DPH3P1Q9H4G8 78 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 JPT2Q9H910 190 aa7.66□□□□□ -1.18
CPNE3-212ENST00000621783 TRGV1A0A0A0MS02 117 aa7.65□□□□□ -1.18
CPNE3-212ENST00000621783 MGPP08493 103 aa7.65□□□□□ -1.18
CPNE3-212ENST00000621783 RAB4AP20338 218 aa7.65□□□□□ -1.18
CPNE3-212ENST00000621783 MRPL51Q4U2R6 128 aaKnown RBP7.65□□□□□ -1.18
CPNE3-212ENST00000621783 PIK3CD-AS1Q5SR53 167 aa7.65□□□□□ -1.18
CPNE3-212ENST00000621783 RETNQ9HD89 108 aa7.65□□□□□ -1.18
CPNE3-212ENST00000621783 NOP10Q9NPE3 64 aaKnown RBP7.65□□□□□ -1.18
CPNE3-212ENST00000621783 TP53TG1Q9Y2A0 90 aa7.65□□□□□ -1.18
CPNE3-212ENST00000621783 KIF25-AS1Q9Y6Z4 181 aa7.65□□□□□ -1.18
CPNE3-212ENST00000621783 A0A087WWL8 130 aa7.64□□□□□ -1.19
CPNE3-212ENST00000621783 IGHV4-28A0A0C4DH34 117 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms