RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 A0A087WW49 117 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 ZFAND2AQ8N6M9 145 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
CIITA-212ENST00000618207 C18orf15Q96N68 181 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 GNRH2O43555 120 aa9.36□□□□□ -0.91
CIITA-212ENST00000618207 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
CIITA-212ENST00000618207 PSMG4Q5JS54 123 aa9.36□□□□□ -0.91
CIITA-212ENST00000618207 GATD1Q8NB37 220 aa9.36□□□□□ -0.91
CIITA-212ENST00000618207 ZNF702PQ9H963 129 aa9.36□□□□□ -0.91
CIITA-212ENST00000618207 A0A096LNJ9 63 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 AZU1P20160 251 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 ANXA2RQ3ZCQ2 193 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 DEFB104AQ8WTQ1 72 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 LINC00477Q96M19 166 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 TRAV9-2A0A087WT02 112 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 OVOL1O14753 267 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
CIITA-212ENST00000618207 PSMG3-AS1Q96PY0 264 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 HSPB8Q9UJY1 196 aa9.35□□□□□ -0.91
CIITA-212ENST00000618207 MUC4Q99102 2169 aa9.34□□□□□ -0.91
CIITA-212ENST00000618207 MS4A6AQ9H2W1 248 aa9.34□□□□□ -0.91
CIITA-212ENST00000618207 TNFRSF18Q9Y5U5 241 aa9.34□□□□□ -0.91
CIITA-212ENST00000618207 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
CIITA-212ENST00000618207 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
CIITA-212ENST00000618207 HOXD3P31249 432 aaPredicted RBP9.34□□□□□ -0.91
CIITA-212ENST00000618207 CITED1Q99966 193 aa9.34□□□□□ -0.91
CIITA-212ENST00000618207 ZNF747Q9BV97 191 aa9.34□□□□□ -0.91
CIITA-212ENST00000618207 SLURP1P55000 103 aa9.33□□□□□ -0.92
CIITA-212ENST00000618207 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
CIITA-212ENST00000618207 DCANP1Q8TF63 244 aa9.33□□□□□ -0.92
CIITA-212ENST00000618207 MRPS16Q9Y3D3 137 aaKnown RBP9.33□□□□□ -0.92
CIITA-212ENST00000618207 U3KQK5 164 aa9.33□□□□□ -0.92
CIITA-212ENST00000618207 TRAV12-3A0A0B4J271 114 aa9.33□□□□□ -0.92
CIITA-212ENST00000618207 TRAV21A0A0B4J279 112 aa9.33□□□□□ -0.92
CIITA-212ENST00000618207 SNAI2O43623 268 aa9.33□□□□□ -0.92
CIITA-212ENST00000618207 KLHDC1Q8N7A1 406 aa9.33□□□□□ -0.92
CIITA-212ENST00000618207 TRBV7-9A0A0J9YWB2 115 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 C14orf178Q8N769 122 aaPredicted RBP9.32□□□□□ -0.92
CIITA-212ENST00000618207 SIGMAR1Q99720 223 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 MAP1LC3AQ9H492 121 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 PHLDA3Q9Y5J5 127 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 JMJD1CQ15652 2540 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 TSPAN13O95857 204 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 FSHBP01225 129 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 SRSF2Q01130 221 aaKnown RBP9.32□□□□□ -0.92
CIITA-212ENST00000618207 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 MTURNQ8N3F0 131 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 MGPP08493 103 aa9.32□□□□□ -0.92
CIITA-212ENST00000618207 NIPBLQ6KC79 2804 aaeCLIP9.32□□□□□ -0.92
CIITA-212ENST00000618207 LGALS1P09382 135 aaKnown RBP9.31□□□□□ -0.92
CIITA-212ENST00000618207 ID1P41134 155 aa9.31□□□□□ -0.92
CIITA-212ENST00000618207 CACNG7P62955 275 aa9.31□□□□□ -0.92
CIITA-212ENST00000618207 TCTEX1D4Q5JR98 221 aa9.31□□□□□ -0.92
CIITA-212ENST00000618207 UNC79Q9P2D8 2635 aa9.31□□□□□ -0.92
CIITA-212ENST00000618207 K7EMT4 169 aa9.31□□□□□ -0.92
CIITA-212ENST00000618207 CRXO43186 299 aaPredicted RBP9.31□□□□□ -0.92
CIITA-212ENST00000618207 LEPP41159 167 aa9.31□□□□□ -0.92
CIITA-212ENST00000618207 ASIPP42127 132 aa9.31□□□□□ -0.92
CIITA-212ENST00000618207 HBDP02042 147 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 HTN1P15515 57 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 A0A1W2PRX2 142 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 TSPOP30536 169 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 OR11H1Q8NG94 326 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 JPT2Q9H910 190 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 NACAE9PAV3 2078 aa9.3□□□□□ -0.92
CIITA-212ENST00000618207 PDZD2O15018 2839 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 GCN1Q92616 2671 aaKnown RBP9.29□□□□□ -0.92
CIITA-212ENST00000618207 OR11H12B2RN74 326 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 AMMECR1LQ6DCA0 310 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 OR2K2Q8NGT1 345 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 OR11H2Q8NH07 326 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 GTSF1LQ9H1H1 148 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 ELANEP08246 267 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 CD7P09564 240 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 BOD1L2Q8IYS8 172 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 LRRC75A-AS1Q8N1F1 130 aa9.29□□□□□ -0.92
CIITA-212ENST00000618207 FAM159AQ6UWV7 190 aa9.28□□□□□ -0.92
CIITA-212ENST00000618207 ERASQ7Z444 233 aa9.28□□□□□ -0.92
CIITA-212ENST00000618207 IFI27L1Q96BM0 104 aa9.28□□□□□ -0.92
CIITA-212ENST00000618207 UBE2E2Q96LR5 201 aa9.28□□□□□ -0.92
CIITA-212ENST00000618207 GEMIN7Q9H840 131 aaKnown RBP9.28□□□□□ -0.92
CIITA-212ENST00000618207 SNRPD3P62318 126 aaKnown RBP9.28□□□□□ -0.92
CIITA-212ENST00000618207 TMEM158Q8WZ71 300 aa9.28□□□□□ -0.92
CIITA-212ENST00000618207 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
CIITA-212ENST00000618207 ZNF580Q9UK33 172 aa9.28□□□□□ -0.92
CIITA-212ENST00000618207 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.92
CIITA-212ENST00000618207 LINC01545Q5VT33 79 aa9.27□□□□□ -0.92
CIITA-212ENST00000618207 SS18L2Q9UHA2 77 aa9.27□□□□□ -0.92
CIITA-212ENST00000618207 TAX1BP3O14907 124 aa9.27□□□□□ -0.93
CIITA-212ENST00000618207 HIVEP2P31629 2446 aa9.27□□□□□ -0.93
CIITA-212ENST00000618207 A0A087WWL8 130 aa9.27□□□□□ -0.93
CIITA-212ENST00000618207 KNCNA6PVL3 124 aa9.27□□□□□ -0.93
CIITA-212ENST00000618207 PRSS1P07477 247 aa9.27□□□□□ -0.93
CIITA-212ENST00000618207 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms