RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 C11orf72Q8NBR9 251 aa8.53□□□□□ -1.04
PDPN-211ENST00000617617 SMIM9A6NGZ8 99 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 GNRH2O43555 120 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 ARMS2P0C7Q2 107 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 XCL2Q9UBD3 114 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 TMSB15BA0A087X1C1 80 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 GRIFINA4D1Z8 144 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 G3V4G9 280 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 MUC21Q5SSG8 566 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 SPXQ9BT56 116 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 NAGKQ9UJ70 344 aa8.52□□□□□ -1.05
PDPN-211ENST00000617617 IGHV4-30-4P0DP06 118 aa8.51□□□□□ -1.05
PDPN-211ENST00000617617 RPL35AP18077 110 aaKnown RBP8.51□□□□□ -1.05
PDPN-211ENST00000617617 POM121L12Q8N7R1 296 aa8.51□□□□□ -1.05
PDPN-211ENST00000617617 FRZBQ92765 325 aa8.51□□□□□ -1.05
PDPN-211ENST00000617617 ZNF415Q09FC8 603 aa8.51□□□□□ -1.05
PDPN-211ENST00000617617 ZFP82Q8N141 532 aa8.51□□□□□ -1.05
PDPN-211ENST00000617617 TMEM191AQ9H0A3 160 aa8.51□□□□□ -1.05
PDPN-211ENST00000617617 Q6ZWC4 215 aa8.5□□□□□ -1.05
PDPN-211ENST00000617617 RNASE8Q8TDE3 154 aaKnown RBP8.5□□□□□ -1.05
PDPN-211ENST00000617617 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
PDPN-211ENST00000617617 LINC01587Q99440 93 aa8.5□□□□□ -1.05
PDPN-211ENST00000617617 CBY3A6NI87 242 aa8.5□□□□□ -1.05
PDPN-211ENST00000617617 H3BVH4 76 aa8.5□□□□□ -1.05
PDPN-211ENST00000617617 MRPL54Q6P161 138 aaKnown RBP8.5□□□□□ -1.05
PDPN-211ENST00000617617 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
PDPN-211ENST00000617617 SPRY2O43597 315 aa8.49□□□□□ -1.05
PDPN-211ENST00000617617 NTF3P20783 257 aa8.49□□□□□ -1.05
PDPN-211ENST00000617617 S100A4P26447 101 aaKnown RBP8.49□□□□□ -1.05
PDPN-211ENST00000617617 RPS10P46783 165 aaKnown RBP8.49□□□□□ -1.05
PDPN-211ENST00000617617 C16orf74Q96GX8 76 aa8.49□□□□□ -1.05
PDPN-211ENST00000617617 PKD1L1Q8TDX9 2849 aa8.49□□□□□ -1.05
PDPN-211ENST00000617617 DAZ2Q13117 558 aaKnown RBP8.49□□□□□ -1.05
PDPN-211ENST00000617617 OR10AG1Q8NH19 301 aa8.49□□□□□ -1.05
PDPN-211ENST00000617617 GSN-AS1Q9NRJ2 163 aa8.49□□□□□ -1.05
PDPN-211ENST00000617617 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
PDPN-211ENST00000617617 TRAPPC1Q9Y5R8 145 aa8.49□□□□□ -1.05
PDPN-211ENST00000617617 FRMD6-AS1P0C7T7 363 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 SYT8Q8NBV8 401 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 OVOL2Q9BRP0 275 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 PHLDA3Q9Y5J5 127 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 SNURFLB1AK76 121 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 TRGC1P0CF51 173 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
PDPN-211ENST00000617617 U3KQK5 164 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 PLAC8L1A1L4L8 177 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 M0R2P5 195 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 RNF183Q96D59 192 aa8.48□□□□□ -1.05
PDPN-211ENST00000617617 C1orf196B1AJZ1 125 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 TWIST1Q15672 202 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 FAM104BQ5XKR9 115 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 X6R8D5 127 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 SPINK4O60575 86 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 APCSP02743 223 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 TRGC2P03986 189 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 SPANXN1Q5VSR9 72 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 RASL10AQ92737 203 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 EDA2RQ9HAV5 297 aa8.47□□□□□ -1.05
PDPN-211ENST00000617617 NACAE9PAV3 2078 aa8.46□□□□□ -1.05
PDPN-211ENST00000617617 TMEM208Q9BTX3 173 aa8.46□□□□□ -1.05
PDPN-211ENST00000617617 TPPP3Q9BW30 176 aa8.46□□□□□ -1.05
PDPN-211ENST00000617617 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
PDPN-211ENST00000617617 C18orf15Q96N68 181 aa8.46□□□□□ -1.06
PDPN-211ENST00000617617 AP1S3Q96PC3 154 aa8.46□□□□□ -1.06
PDPN-211ENST00000617617 CIDEAO60543 219 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 CAMPP49913 170 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 RAB5BP61020 215 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 FABP9Q0Z7S8 132 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 SLAQ13239 276 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 SMIM15Q7Z3B0 74 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 RNF185Q96GF1 192 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 PPBPP02775 128 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 AZU1P20160 251 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 UFSP1Q6NVU6 142 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 RCHY1Q96PM5 261 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 DPH3P1Q9H4G8 78 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 MSRB1Q9NZV6 116 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 LAMTOR2Q9Y2Q5 125 aa8.45□□□□□ -1.06
PDPN-211ENST00000617617 MIFP14174 115 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 RRN3P1Q2M238 152 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 A8MWV9 139 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 RAB4AP20338 218 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 LINC00315P59091 139 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 COA6Q5JTJ3 125 aaKnown RBP8.44□□□□□ -1.06
PDPN-211ENST00000617617 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 M0R381 172 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 SMIM6P0DI80 62 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 NIT2Q9NQR4 276 aa8.44□□□□□ -1.06
PDPN-211ENST00000617617 PRSS47A8MTI9 375 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 RS1O15537 224 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 HIST1H2BKO60814 126 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 HIST1H2BJP06899 126 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 HIST1H2BOP23527 126 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 HIST1H2BBP33778 126 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 HIST1H2BDP58876 126 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 HIST1H2BCP62807 126 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 Q0VG73 95 aa8.43□□□□□ -1.06
PDPN-211ENST00000617617 HIST2H2BEQ16778 126 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms