RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SLC25A16P16260 332 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 ODF1Q14990 250 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 AJUBAQ96IF1 538 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 HLA-DRB4X5D2U9 266 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 C2CD3Q4AC94 2353 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 WNK1Q9H4A3 2382 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 DSPP15924 2871 aaKnown RBP6.66□□□□□ -1.34
LIG4-204ENST00000611712 SDHAF1A6NFY7 115 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 PRADC1Q9BSG0 188 aa6.66□□□□□ -1.34
LIG4-204ENST00000611712 H3BUA1 57 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 LINC01356Q8N9X3 169 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 MYO15AQ9UKN7 3530 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 DSCAML1Q8TD84 2053 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 MYMXA0A1B0GTQ4 84 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 CD28P10747 220 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 SRSF2Q01130 221 aaKnown RBP6.65□□□□□ -1.34
LIG4-204ENST00000611712 CEND1Q8N111 149 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 C11orf44Q8N8P7 122 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 PGPEP1Q9NXJ5 209 aa6.65□□□□□ -1.34
LIG4-204ENST00000611712 USP9XQ93008 2570 aaPredicted RBP6.65□□□□□ -1.34
LIG4-204ENST00000611712 TRAV2A0A0B4J234 112 aa6.65□□□□□ -1.35
LIG4-204ENST00000611712 PRSS29PA6NIE9 313 aa6.65□□□□□ -1.35
LIG4-204ENST00000611712 IGHV4-59P01825 116 aa6.65□□□□□ -1.35
LIG4-204ENST00000611712 PEMTQ9UBM1 199 aa6.65□□□□□ -1.35
LIG4-204ENST00000611712 A0A1W2PRX2 142 aa6.65□□□□□ -1.35
LIG4-204ENST00000611712 C19orf84I3L1E1 186 aa6.65□□□□□ -1.35
LIG4-204ENST00000611712 CCDC168Q8NDH2 2452 aa6.65□□□□□ -1.35
LIG4-204ENST00000611712 K7EMI3 77 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 IGF1P05019 195 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 GATA3P23771 443 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 FXYD2P54710 66 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 ADAMTSL5Q6ZMM2 481 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 MTURNQ8N3F0 131 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 C10orf105Q8TEF2 133 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 U3KQK5 164 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
LIG4-204ENST00000611712 COX6CP09669 75 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 DEFB131AP59861 70 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 RNF185Q96GF1 192 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 NOTCH2Q04721 2471 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 RNF223E7ERA6 249 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 PMVKQ15126 192 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 DEFB112Q30KQ8 113 aa6.64□□□□□ -1.35
LIG4-204ENST00000611712 NBEAQ8NFP9 2946 aa6.63□□□□□ -1.35
LIG4-204ENST00000611712 IGHV1OR15-1A0A075B7D0 117 aa6.63□□□□□ -1.35
LIG4-204ENST00000611712 GAS8-AS1O95177 125 aa6.63□□□□□ -1.35
LIG4-204ENST00000611712 CDKN1BP46527 198 aa6.63□□□□□ -1.35
LIG4-204ENST00000611712 TLN2Q9Y4G6 2542 aa6.63□□□□□ -1.35
LIG4-204ENST00000611712 KNCNA6PVL3 124 aa6.63□□□□□ -1.35
LIG4-204ENST00000611712 IGHG2P01859 326 aa6.63□□□□□ -1.35
LIG4-204ENST00000611712 TRAV8-2A0A0B4J237 113 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 RPL13AP40429 203 aaKnown RBP6.62□□□□□ -1.35
LIG4-204ENST00000611712 AMTNQ6UX39 209 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 TRPT1Q86TN4 253 aaKnown RBP6.62□□□□□ -1.35
LIG4-204ENST00000611712 NRGNQ92686 78 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 ATP6V0BQ99437 205 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 C11orf21Q9P2W6 132 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 MYO18BQ8IUG5 2567 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 C12orf74Q32Q52 190 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 TCTEX1D4Q5JR98 221 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 FRYQ5TBA9 3013 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 A0A1W2PPR1 153 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
LIG4-204ENST00000611712 TAL2Q16559 108 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 ETDBQ3ZM63 59 aa6.62□□□□□ -1.35
LIG4-204ENST00000611712 H3BMG7 143 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 SAP30O75446 220 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 RRN3P1Q2M238 152 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 TMEM141Q96I45 108 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 C20orf173Q96LM9 149 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 NACAE9PAV3 2078 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 SMAGPQ0VAQ4 97 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 C2orf91Q6ZV80 131 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 SONP18583 2426 aaKnown RBP6.61□□□□□ -1.35
LIG4-204ENST00000611712 DLX4Q92988 240 aaPredicted RBP6.61□□□□□ -1.35
LIG4-204ENST00000611712 SPXQ9BT56 116 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 HIGD1BQ9P298 99 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 IGKV2D-26A0A0A0MRZ7 120 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 IGKV3OR2-268A0A0C4DH90 116 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 CLPSL1A2RUU4 121 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 UBE2L6O14933 153 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 STHQ8IWL8 128 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 GATD1Q8NB37 220 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 SIGMAR1Q99720 223 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 COL6A3P12111 3177 aa6.61□□□□□ -1.35
LIG4-204ENST00000611712 C19orf54Q5BKX5 351 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 GTSF1LQ9H1H1 148 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 PTPRBP23467 1997 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 A6NDX4 124 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 ZNF415Q09FC8 603 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 SUMO4Q6EEV6 95 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 Q6ZQT7 251 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 PLEKHB2Q96CS7 222 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 JPT2Q9H910 190 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 KLHL30-AS1Q8NEE0 82 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 ERG28Q9UKR5 140 aa6.6□□□□□ -1.35
LIG4-204ENST00000611712 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 ZFAND2AQ8N6M9 145 aa6.59□□□□□ -1.35
LIG4-204ENST00000611712 PHLDA1Q8WV24 401 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms