RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	RPL37A	P61513	92 aa	Known RBP	11.83	□□□□□ -0.52
IRF3-231	ENST00000602190	HYLS1	Q96M11	299 aa		11.83	□□□□□ -0.52
IRF3-231	ENST00000602190	OR5AC2	Q9NZP5	309 aa		11.83	□□□□□ -0.52
IRF3-231	ENST00000602190	FAM74A1	Q5RGS3	127 aa		11.82	□□□□□ -0.52
IRF3-231	ENST00000602190	CMTM2	Q8TAZ6	248 aa		11.82	□□□□□ -0.52
IRF3-231	ENST00000602190	CHCHD7	Q9BUK0	85 aa		11.82	□□□□□ -0.52
IRF3-231	ENST00000602190	MBD2	Q9UBB5	411 aa		11.82	□□□□□ -0.52
IRF3-231	ENST00000602190	GAGE12J	A6NER3	117 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	TAAR5	O14804	337 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	SEC11B	P0C7V7	166 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	GAGE1	Q13065	139 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	GAGE4	Q13068	117 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	GAGE5	Q13069	117 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	GAGE13	Q4V321	117 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	FFAR4	Q5NUL3	377 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	PQLC2	Q6ZP29	291 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	OR10G9	Q8NGN4	311 aa		11.81	□□□□□ -0.52
IRF3-231	ENST00000602190	SERTM2	A0A1B0GWG4	89 aa		11.8	□□□□□ -0.52
IRF3-231	ENST00000602190		A8MWV9	139 aa		11.8	□□□□□ -0.52
IRF3-231	ENST00000602190	TMEM75	Q8N9X5	138 aa		11.8	□□□□□ -0.52
IRF3-231	ENST00000602190	TNXB	P22105	4242 aa		11.8	□□□□□ -0.52
IRF3-231	ENST00000602190	RNF213	Q63HN8	5207 aa		11.8	□□□□□ -0.52
IRF3-231	ENST00000602190	IGKV2D-24	A0A075B6R9	120 aa		11.79	□□□□□ -0.52
IRF3-231	ENST00000602190	H2AFB2	P0C5Z0	115 aa		11.79	□□□□□ -0.52
IRF3-231	ENST00000602190	GNG5	P63218	68 aa		11.79	□□□□□ -0.52
IRF3-231	ENST00000602190	SAMD10	Q9BYL1	202 aa		11.79	□□□□□ -0.52
IRF3-231	ENST00000602190	NMES1	Q9C002	83 aa		11.79	□□□□□ -0.52
IRF3-231	ENST00000602190	RPH3AL	Q9UNE2	315 aa		11.79	□□□□□ -0.52
IRF3-231	ENST00000602190	EIF3G	O75821	320 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
IRF3-231	ENST00000602190	FGF8	P55075	233 aa	Predicted RBP	11.78	□□□□□ -0.52
IRF3-231	ENST00000602190	SUN5	Q8TC36	379 aa		11.78	□□□□□ -0.52
IRF3-231	ENST00000602190	KLK12	Q9UKR0	248 aa		11.78	□□□□□ -0.52
IRF3-231	ENST00000602190	CCDC160	A6NGH7	325 aa		11.77	□□□□□ -0.53
IRF3-231	ENST00000602190	GCG	P01275	180 aa		11.77	□□□□□ -0.53
IRF3-231	ENST00000602190	C14orf177	Q52M58	125 aa		11.77	□□□□□ -0.53
IRF3-231	ENST00000602190		Q6ZRU5	148 aa		11.77	□□□□□ -0.53
IRF3-231	ENST00000602190	C14orf178	Q8N769	122 aa	Predicted RBP	11.77	□□□□□ -0.53
IRF3-231	ENST00000602190	NDFIP1	Q9BT67	221 aa		11.77	□□□□□ -0.53
IRF3-231	ENST00000602190	IGKV3D-20	A0A0C4DH25	116 aa		11.76	□□□□□ -0.53
IRF3-231	ENST00000602190	TCRA	P04437	139 aa		11.76	□□□□□ -0.53
IRF3-231	ENST00000602190	SGK494	Q96LW2	274 aa		11.76	□□□□□ -0.53
IRF3-231	ENST00000602190	C5orf17	Q8NAS9	161 aa		11.75	□□□□□ -0.53
IRF3-231	ENST00000602190	OR10G7	Q8NGN6	311 aa		11.75	□□□□□ -0.53
IRF3-231	ENST00000602190	UBE2W	Q96B02	151 aa		11.75	□□□□□ -0.53
IRF3-231	ENST00000602190	JPT2	Q9H910	190 aa		11.75	□□□□□ -0.53
IRF3-231	ENST00000602190	PSG8	Q9UQ74	426 aa		11.75	□□□□□ -0.53
IRF3-231	ENST00000602190	HSPB11	Q9Y547	144 aa		11.75	□□□□□ -0.53
IRF3-231	ENST00000602190	SIX6	O95475	246 aa		11.74	□□□□□ -0.53
IRF3-231	ENST00000602190		Q0VG73	95 aa		11.74	□□□□□ -0.53
IRF3-231	ENST00000602190	CIRBP	Q14011	172 aa	Known RBP	11.74	□□□□□ -0.53
IRF3-231	ENST00000602190	ELOB	Q15370	118 aa		11.74	□□□□□ -0.53
IRF3-231	ENST00000602190	DNLZ	Q5SXM8	178 aa		11.74	□□□□□ -0.53
IRF3-231	ENST00000602190	C9orf163	Q8N9P6	203 aa		11.74	□□□□□ -0.53
IRF3-231	ENST00000602190	OR2T35	Q8NGX2	323 aa		11.74	□□□□□ -0.53
IRF3-231	ENST00000602190	IL36B	Q9NZH7	164 aa		11.74	□□□□□ -0.53
IRF3-231	ENST00000602190	URGCP-MRPS24	S4R325	110 aa		11.74	□□□□□ -0.53
IRF3-231	ENST00000602190	SMUG1	Q53HV7	270 aa		11.73	□□□□□ -0.53
IRF3-231	ENST00000602190	ENHO	Q6UWT2	76 aa		11.73	□□□□□ -0.53
IRF3-231	ENST00000602190	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.73	□□□□□ -0.53
IRF3-231	ENST00000602190	PANO1	I0J062	215 aa		11.72	□□□□□ -0.53
IRF3-231	ENST00000602190	RHOD	O00212	210 aa		11.72	□□□□□ -0.53
IRF3-231	ENST00000602190	FLI1	Q01543	452 aa	Predicted RBP	11.72	□□□□□ -0.53
IRF3-231	ENST00000602190	DGAT2L7P	Q6IED9	249 aa		11.72	□□□□□ -0.53
IRF3-231	ENST00000602190	RAB2A	P61019	212 aa		11.71	□□□□□ -0.53
IRF3-231	ENST00000602190	CYCS	P99999	105 aa	Known RBP	11.71	□□□□□ -0.53
IRF3-231	ENST00000602190	LRRC37A5P	Q49AS3	106 aa		11.71	□□□□□ -0.53
IRF3-231	ENST00000602190	CCDC32	Q9BV29	185 aa		11.71	□□□□□ -0.53
IRF3-231	ENST00000602190	STAG3L2	P0CL84	134 aa		11.7	□□□□□ -0.54
IRF3-231	ENST00000602190	STAG3L3	P0CL85	134 aa		11.7	□□□□□ -0.54
IRF3-231	ENST00000602190	ARL14EPL	P0DKL9	152 aa		11.7	□□□□□ -0.54
IRF3-231	ENST00000602190	H2BFS	P57053	126 aa		11.7	□□□□□ -0.54
IRF3-231	ENST00000602190	DMRTA1	Q5VZB9	504 aa		11.7	□□□□□ -0.54
IRF3-231	ENST00000602190	KRTAP26-1	Q6PEX3	210 aa		11.7	□□□□□ -0.54
IRF3-231	ENST00000602190	SDIM1	Q6ZPB5	146 aa		11.7	□□□□□ -0.54
IRF3-231	ENST00000602190	PPP1R1C	Q8WVI7	109 aa		11.7	□□□□□ -0.54
IRF3-231	ENST00000602190		A0A087WX48	190 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	TRBV10-1	A0A0K0K1A3	114 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	USP17L23	D6RBM5	183 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	PRSS1	P07477	247 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	UBE2D3	P61077	147 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	UBE2D2	P62837	147 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	ZFP69	Q49AA0	526 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	SCGB1C1	Q8TD33	95 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	C1orf43	Q9BWL3	253 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	WFDC1	Q9HC57	220 aa		11.69	□□□□□ -0.54
IRF3-231	ENST00000602190	FAM240B	A0A1B0GVZ2	78 aa		11.68	□□□□□ -0.54
IRF3-231	ENST00000602190		A0A1W2PPV4	95 aa		11.68	□□□□□ -0.54
IRF3-231	ENST00000602190		K7EQM0	130 aa		11.68	□□□□□ -0.54
IRF3-231	ENST00000602190	SAPCD1	Q5SSQ6	148 aa		11.68	□□□□□ -0.54
IRF3-231	ENST00000602190	MPC2	O95563	127 aa		11.67	□□□□□ -0.54
IRF3-231	ENST00000602190	ASIP	P42127	132 aa		11.67	□□□□□ -0.54
IRF3-231	ENST00000602190	COX8C	Q7Z4L0	72 aa		11.67	□□□□□ -0.54
IRF3-231	ENST00000602190	OR10G8	Q8NGN5	311 aa		11.67	□□□□□ -0.54
IRF3-231	ENST00000602190	SFRP2	Q96HF1	295 aa		11.67	□□□□□ -0.54
IRF3-231	ENST00000602190	EPDR1	Q9UM22	224 aa		11.67	□□□□□ -0.54
IRF3-231	ENST00000602190	HMGB3	O15347	200 aa	Known RBP	11.66	□□□□□ -0.54
IRF3-231	ENST00000602190	S100A4	P26447	101 aa	Known RBP	11.66	□□□□□ -0.54
IRF3-231	ENST00000602190	RPL12	P30050	165 aa	Known RBP	11.66	□□□□□ -0.54
IRF3-231	ENST00000602190	RPL19	P84098	196 aa	Known RBP	11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms