RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 DMXL1Q9Y485 3027 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 A0A1W2PPR1 153 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 CRYGDP07320 174 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 RNASE4P34096 147 aaKnown RBP9.98□□□□□ -0.81
VRK3-209ENST00000594948 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
VRK3-209ENST00000594948 LINC00315P59091 139 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 AMTNQ6UX39 209 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 SH2D6Q7Z4S9 175 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 GTSF1LQ9H1H1 148 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 IGLV4-69A0A075B6H9 119 aa9.97□□□□□ -0.81
VRK3-209ENST00000594948 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
VRK3-209ENST00000594948 NDUFS8O00217 210 aa9.97□□□□□ -0.81
VRK3-209ENST00000594948 UBE2D3P61077 147 aa9.97□□□□□ -0.81
VRK3-209ENST00000594948 UBE2D2P62837 147 aa9.97□□□□□ -0.81
VRK3-209ENST00000594948 PMVKQ15126 192 aa9.97□□□□□ -0.81
VRK3-209ENST00000594948 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
VRK3-209ENST00000594948 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
VRK3-209ENST00000594948 MRPL16Q9NX20 251 aaKnown RBP9.97□□□□□ -0.81
VRK3-209ENST00000594948 KLLNB2CW77 178 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 J3KRW8 73 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 VCYO14598 125 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 DUSP14O95147 198 aaKnown RBP9.96□□□□□ -0.81
VRK3-209ENST00000594948 CD7P09564 240 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 LCNL1Q6ZST4 164 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 BPESC1Q9GZL8 116 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 ADGRG4Q8IZF6 3080 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 MUC4Q99102 2169 aa9.96□□□□□ -0.81
VRK3-209ENST00000594948 TRBV6-5A0A0K0K1A5 114 aa9.96□□□□□ -0.82
VRK3-209ENST00000594948 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
VRK3-209ENST00000594948 GNRH2O43555 120 aa9.96□□□□□ -0.82
VRK3-209ENST00000594948 IGHV1-69P01742 117 aa9.96□□□□□ -0.82
VRK3-209ENST00000594948 TMEM219Q86XT9 240 aa9.96□□□□□ -0.82
VRK3-209ENST00000594948 PLEKHB2Q96CS7 222 aa9.96□□□□□ -0.82
VRK3-209ENST00000594948 A0A0J9YY99 117 aa9.95□□□□□ -0.82
VRK3-209ENST00000594948 APOMO95445 188 aa9.95□□□□□ -0.82
VRK3-209ENST00000594948 TSPAN13O95857 204 aa9.95□□□□□ -0.82
VRK3-209ENST00000594948 TSHBP01222 138 aa9.95□□□□□ -0.82
VRK3-209ENST00000594948 IGHG2P01859 326 aa9.95□□□□□ -0.82
VRK3-209ENST00000594948 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
VRK3-209ENST00000594948 UBTD1Q9HAC8 227 aa9.95□□□□□ -0.82
VRK3-209ENST00000594948 TP53TG1Q9Y2A0 90 aa9.95□□□□□ -0.82
VRK3-209ENST00000594948 PTPRQQ9UMZ3 2332 aa9.95□□□□□ -0.82
VRK3-209ENST00000594948 TRBV12-3P01733 135 aa9.94□□□□□ -0.82
VRK3-209ENST00000594948 SMAGPQ0VAQ4 97 aa9.94□□□□□ -0.82
VRK3-209ENST00000594948 FOXI1Q12951 378 aa9.94□□□□□ -0.82
VRK3-209ENST00000594948 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
VRK3-209ENST00000594948 VCX2Q9H322 139 aa9.94□□□□□ -0.82
VRK3-209ENST00000594948 TRBV20-1A0A075B6N2 111 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 A0A1B0GV72 72 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 K7EMT4 169 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 LGALS9O00182 355 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 SPRY2O43597 315 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 TCTEX1D4Q5JR98 221 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 SUMO4Q6EEV6 95 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 KIR2DL4Q99706 377 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 ID1P41134 155 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
VRK3-209ENST00000594948 FAM159AQ6UWV7 190 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 NDUFA11Q86Y39 141 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 SBSPONQ8IVN8 264 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 SLC25A29Q8N8R3 303 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 RHPN1-AS1Q9BWJ2 59 aa9.93□□□□□ -0.82
VRK3-209ENST00000594948 TLN1Q9Y490 2541 aaKnown RBP9.93□□□□□ -0.82
VRK3-209ENST00000594948 ZNF876PQ49A33 203 aa9.92□□□□□ -0.82
VRK3-209ENST00000594948 LINC00527Q9UJ94 153 aa9.92□□□□□ -0.82
VRK3-209ENST00000594948 TACC2O95359 2948 aa9.92□□□□□ -0.82
VRK3-209ENST00000594948 HRNRQ86YZ3 2850 aaPredicted RBP9.92□□□□□ -0.82
VRK3-209ENST00000594948 A6NDX4 124 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 F6UB75 175 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 RHOHQ15669 191 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 NFE4Q86UQ8 179 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 DAZ1Q9NQZ3 744 aaKnown RBP9.91□□□□□ -0.82
VRK3-209ENST00000594948 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 ATMQ13315 3056 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 DCHS2Q6V1P9 2916 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 IGLV1-40P01703 118 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 DEFB1P60022 68 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 RPL11P62913 178 aaKnown RBP9.91□□□□□ -0.82
VRK3-209ENST00000594948 NSUN5P1Q3KNT7 163 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 KLHL30-AS1Q8NEE0 82 aa9.91□□□□□ -0.82
VRK3-209ENST00000594948 RIF1Q5UIP0 2472 aaKnown RBP9.9□□□□□ -0.82
VRK3-209ENST00000594948 PSMB2P49721 201 aa9.9□□□□□ -0.82
VRK3-209ENST00000594948 INSL3P51460 131 aa9.9□□□□□ -0.82
VRK3-209ENST00000594948 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
VRK3-209ENST00000594948 PPDPFLQ8WWR9 84 aa9.9□□□□□ -0.82
VRK3-209ENST00000594948 C9orf85Q96MD7 179 aa9.9□□□□□ -0.82
VRK3-209ENST00000594948 LOC107984156A0A0G2JMH3 177 aa9.89□□□□□ -0.83
VRK3-209ENST00000594948 SDHAF1A6NFY7 115 aa9.89□□□□□ -0.83
VRK3-209ENST00000594948 M0QXV9 152 aa9.89□□□□□ -0.83
VRK3-209ENST00000594948 ARL17AQ8IVW1 177 aa9.89□□□□□ -0.83
VRK3-209ENST00000594948 MTURNQ8N3F0 131 aa9.89□□□□□ -0.83
VRK3-209ENST00000594948 AMELXQ99217 191 aa9.89□□□□□ -0.83
VRK3-209ENST00000594948 PF4V1P10720 104 aa9.89□□□□□ -0.83
VRK3-209ENST00000594948 TEN1Q86WV5 123 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms