RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 NAT8Q9UHE5 227 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 MUC2Q02817 5179 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 IGHV3OR16-12A0A075B7B8 117 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 A0A1W2PPQ1 181 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 TMEM189A5PLL7 270 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 FABP5P3A8MUU1 101 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 KRBOX1C9JBD0 128 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 PRAC2D3DTV9 90 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 H7BYZ3 331 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 M0R2Z0 102 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 GCGP01275 180 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 LTAP01374 205 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 PLA2G1BP04054 148 aaKnown RBP4.18□□□□□ -1.74
VPS25-204ENST00000589577 SRP19P09132 144 aaKnown RBP4.18□□□□□ -1.74
VPS25-204ENST00000589577 CRISP2P16562 243 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 GCSHP23434 173 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 RNASE4P34096 147 aaKnown RBP4.18□□□□□ -1.74
VPS25-204ENST00000589577 CCL18P55774 89 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 OR5I1Q13606 314 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 ADIRFQ15847 76 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 GDF5OSQ5U4N7 250 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 FAM159AQ6UWV7 190 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 TMEM183AQ8IXX5 376 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 EIF4E3Q8N5X7 224 aaKnown RBP4.18□□□□□ -1.74
VPS25-204ENST00000589577 KCNS1Q96KK3 526 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 SGK494Q96LW2 274 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 IGF2BP2-AS1Q96M15 143 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 LINC01587Q99440 93 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 TMEM70Q9BUB7 260 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 FAM30AQ9NZY2 134 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 NAGKQ9UJ70 344 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 KLF12Q9Y4X4 402 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 LY96Q9Y6Y9 160 aa4.18□□□□□ -1.74
VPS25-204ENST00000589577 TRGV11A0A075B6L2 103 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 A0A087WTM6 91 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 TRAV12-3A0A0B4J271 114 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 TEX48A0A1B0GUV7 120 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 M0R036 132 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 NUDT3O95989 172 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 P01737 135 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 ORM1P02763 201 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 PFN1P07737 140 aaKnown RBP4.17□□□□□ -1.74
VPS25-204ENST00000589577 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 HTN1P15515 57 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 S100A4P26447 101 aaKnown RBP4.17□□□□□ -1.74
VPS25-204ENST00000589577 FXYD7P58549 80 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 DEFB1P60022 68 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 ERVFC1-1P60608 527 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 RPS20P60866 119 aaKnown RBP4.17□□□□□ -1.74
VPS25-204ENST00000589577 RPL19P84098 196 aaKnown RBP4.17□□□□□ -1.74
VPS25-204ENST00000589577 RRN3P1Q2M238 152 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 LINC00528Q8N1L1 170 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 BORCS7Q96B45 105 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 TVP23CQ96ET8 276 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 LINC00479Q96M42 142 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 PYGO2Q9BRQ0 406 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 DERL1Q9BUN8 251 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 SEC11CQ9BY50 192 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 SDF2L1Q9HCN8 221 aa4.17□□□□□ -1.74
VPS25-204ENST00000589577 TRAV12-2A0A075B6T6 113 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 TMEM218A2RU14 115 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 SMIM9A6NGZ8 99 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 CBY3A6NI87 242 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 A8MTW9 85 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 ZNF705GA8MUZ8 300 aaPredicted RBP4.16□□□□□ -1.74
VPS25-204ENST00000589577 SNURFLB1AK76 121 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 KLLNB2CW77 178 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 PPP1R2P9O14990 202 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 MT-ND4LP03901 98 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 DAD1P61803 113 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 ZNF415Q09FC8 603 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 IBA57Q5T440 356 aaKnown RBP4.16□□□□□ -1.74
VPS25-204ENST00000589577 GFI1BQ5VTD9 330 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 Q6AWC8 147 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 AMTNQ6UX39 209 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 SVBPQ8N300 66 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 ZFAND2AQ8N6M9 145 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 NHLRC2Q8NBF2 726 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 C8orf49Q96NF6 230 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 UPK3BQ9BT76 320 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 TNFRSF18Q9Y5U5 241 aa4.16□□□□□ -1.74
VPS25-204ENST00000589577 IGHV1OR15-1A0A075B7D0 117 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 A8MWL6 223 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 B4DEV8 164 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 GATCO43716 136 aaKnown RBP4.15□□□□□ -1.75
VPS25-204ENST00000589577 SH2D1AO60880 128 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 SNAPINO95295 136 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 IGLV2-11P01706 119 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 APOC3P02656 99 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 S100PP25815 95 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 SRSF3P84103 164 aaKnown RBP4.15□□□□□ -1.75
VPS25-204ENST00000589577 BTN1A1Q13410 526 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 ZNF493Q6ZR52 646 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 LINC01551Q86U37 167 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 OR2D3Q8NGH3 330 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 C16orf74Q96GX8 76 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 ZC2HC1AQ96GY0 325 aa4.15□□□□□ -1.75
VPS25-204ENST00000589577 EREGO14944 169 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 GAS8-AS1O95177 125 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 RPL23P62829 140 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms