RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SSBP4Q9BWG4 385 aaPredicted RBP10.48□□□□□ -0.73
NPC1-207ENST00000588867 DNHD1Q96M86 4753 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 SNAI2O43623 268 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 CTRLP40313 264 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 TMEM263Q8WUH6 116 aaKnown RBP10.48□□□□□ -0.73
NPC1-207ENST00000588867 TRAV9-1A0A075B6T8 112 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 M0R381 172 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 MED14OSP0DP75 135 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 NTF3P20783 257 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 CAMPP49913 170 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 TWIST1Q15672 202 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 C11orf72Q8NBR9 251 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 RNASE8Q8TDE3 154 aaKnown RBP10.47□□□□□ -0.73
NPC1-207ENST00000588867 FAM210BQ96KR6 192 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 C9orf85Q96MD7 179 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 X6R8D5 127 aa10.47□□□□□ -0.73
NPC1-207ENST00000588867 TRBV24-1A0A075B6N3 115 aa10.46□□□□□ -0.73
NPC1-207ENST00000588867 COLCA2A8K830 154 aa10.46□□□□□ -0.73
NPC1-207ENST00000588867 RIGQ13278 110 aa10.46□□□□□ -0.73
NPC1-207ENST00000588867 SBSPONQ8IVN8 264 aa10.46□□□□□ -0.73
NPC1-207ENST00000588867 C16orf74Q96GX8 76 aa10.46□□□□□ -0.73
NPC1-207ENST00000588867 SCRT2Q9NQ03 307 aa10.46□□□□□ -0.73
NPC1-207ENST00000588867 NBEAL2Q6ZNJ1 2754 aa10.46□□□□□ -0.73
NPC1-207ENST00000588867 SMIM9A6NGZ8 99 aa10.46□□□□□ -0.74
NPC1-207ENST00000588867 SNURFLB1AK76 121 aa10.46□□□□□ -0.74
NPC1-207ENST00000588867 EMP1P54849 157 aa10.46□□□□□ -0.74
NPC1-207ENST00000588867 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.74
NPC1-207ENST00000588867 RETNQ9HD89 108 aa10.46□□□□□ -0.74
NPC1-207ENST00000588867 MSRB1Q9NZV6 116 aa10.46□□□□□ -0.74
NPC1-207ENST00000588867 DNAH3Q8TD57 4116 aa10.46□□□□□ -0.74
NPC1-207ENST00000588867 MUC4Q99102 2169 aa10.46□□□□□ -0.74
NPC1-207ENST00000588867 RAB4BP61018 213 aa10.45□□□□□ -0.74
NPC1-207ENST00000588867 CACNG7P62955 275 aa10.45□□□□□ -0.74
NPC1-207ENST00000588867 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
NPC1-207ENST00000588867 OVOL2Q9BRP0 275 aa10.45□□□□□ -0.74
NPC1-207ENST00000588867 HBBP68871 147 aa10.44□□□□□ -0.74
NPC1-207ENST00000588867 ATP5L2Q7Z4Y8 100 aa10.44□□□□□ -0.74
NPC1-207ENST00000588867 ZFP82Q8N141 532 aa10.44□□□□□ -0.74
NPC1-207ENST00000588867 SPXQ9BT56 116 aa10.44□□□□□ -0.74
NPC1-207ENST00000588867 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
NPC1-207ENST00000588867 NOP10Q9NPE3 64 aaKnown RBP10.44□□□□□ -0.74
NPC1-207ENST00000588867 DEFB4AO15263 64 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 CTAG1AP78358 180 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 ZNF876PQ49A33 203 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 WDR73Q6P4I2 378 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 SYT8Q8NBV8 401 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 TP53TG1Q9Y2A0 90 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 A0A1B0GXF2 115 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 PLAC8L1A1L4L8 177 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 M0R2P5 195 aa10.43□□□□□ -0.74
NPC1-207ENST00000588867 IGHV4-4A0A075B6R2 117 aa10.42□□□□□ -0.74
NPC1-207ENST00000588867 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
NPC1-207ENST00000588867 MIFP14174 115 aa10.42□□□□□ -0.74
NPC1-207ENST00000588867 RAB5AP20339 215 aa10.42□□□□□ -0.74
NPC1-207ENST00000588867 RPS10P46783 165 aaKnown RBP10.42□□□□□ -0.74
NPC1-207ENST00000588867 DEFA6Q01524 100 aa10.42□□□□□ -0.74
NPC1-207ENST00000588867 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
NPC1-207ENST00000588867 TRGV1A0A0A0MS02 117 aa10.41□□□□□ -0.74
NPC1-207ENST00000588867 A0A1B0GW15 77 aa10.41□□□□□ -0.74
NPC1-207ENST00000588867 S100A8P05109 93 aa10.41□□□□□ -0.74
NPC1-207ENST00000588867 RASL11AQ6T310 242 aa10.41□□□□□ -0.74
NPC1-207ENST00000588867 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
NPC1-207ENST00000588867 IL17DQ8TAD2 202 aa10.41□□□□□ -0.74
NPC1-207ENST00000588867 JPT2Q9H910 190 aa10.41□□□□□ -0.74
NPC1-207ENST00000588867 EVI2AP22794 236 aa10.4□□□□□ -0.74
NPC1-207ENST00000588867 DAZ2Q13117 558 aaKnown RBP10.4□□□□□ -0.74
NPC1-207ENST00000588867 Q8NAQ8 132 aa10.4□□□□□ -0.74
NPC1-207ENST00000588867 SPATA25Q9BR10 227 aa10.4□□□□□ -0.74
NPC1-207ENST00000588867 NXPH4O95158 308 aa10.4□□□□□ -0.75
NPC1-207ENST00000588867 TRGC1P0CF51 173 aa10.4□□□□□ -0.75
NPC1-207ENST00000588867 COX19Q49B96 90 aa10.4□□□□□ -0.75
NPC1-207ENST00000588867 TMEM136Q6ZRR5 245 aa10.4□□□□□ -0.75
NPC1-207ENST00000588867 Q6ZTI0 123 aa10.4□□□□□ -0.75
NPC1-207ENST00000588867 C14orf178Q8N769 122 aaPredicted RBP10.4□□□□□ -0.75
NPC1-207ENST00000588867 FRZBQ92765 325 aa10.4□□□□□ -0.75
NPC1-207ENST00000588867 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.75
NPC1-207ENST00000588867 TRAPPC1Q9Y5R8 145 aa10.4□□□□□ -0.75
NPC1-207ENST00000588867 A0A087WWL8 130 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 GAGE7O76087 117 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 GAGE12FP0CL80 117 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 GAGE12GP0CL81 117 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 GAGE12IP0CL82 117 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 SMIM17P0DL12 118 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 RASL10AQ92737 203 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 TM2D3Q9BRN9 247 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 PTH2Q96A98 100 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
NPC1-207ENST00000588867 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
NPC1-207ENST00000588867 HLA-DQA1P01909 254 aa10.37□□□□□ -0.75
NPC1-207ENST00000588867 DEFB130BP0DP73 79 aa10.37□□□□□ -0.75
NPC1-207ENST00000588867 DEFB130AP0DP74 79 aa10.37□□□□□ -0.75
NPC1-207ENST00000588867 FABP9Q0Z7S8 132 aa10.37□□□□□ -0.75
NPC1-207ENST00000588867 FAM222AQ5U5X8 452 aa10.37□□□□□ -0.75
NPC1-207ENST00000588867 AMN1Q8IY45 258 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms