RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 A0A0B4J2C4 111 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 IGHV1-69-2A0A0G2JMI3 117 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 A0A1W2PRS3 328 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 A8MUU9 505 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF670-ZNF695F2Z2N8 137 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 H3BMM0 161 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 KLF7O75840 302 aaPredicted RBP1.74□□□□□ -2.13
VPS4B-203ENST00000588323 CST7O76096 145 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 FSTL3O95633 263 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 OPRM1P35372 400 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 LPAR6P43657 344 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 DAPP51397 102 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 MSMO1Q15800 293 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 FAM74A1Q5RGS3 127 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.74□□□□□ -2.13
VPS4B-203ENST00000588323 LCN15Q6UWW0 184 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 LINC00305Q7Z4B0 112 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 C1orf174Q8IYL3 243 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 TTC9CQ8N5M4 171 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 C3orf22Q8N5N4 141 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 OR2T10Q8NGZ9 312 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 CCL4L1Q8NHW4 92 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 BRK1Q8WUW1 75 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 TMEM106AQ96A25 262 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 UBE2WQ96B02 151 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 MS4A6EQ96DS6 147 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 RMI2Q96E14 147 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 ADAT1Q9BUB4 502 aaKnown RBP1.74□□□□□ -2.13
VPS4B-203ENST00000588323 AICDAQ9GZX7 198 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 C11orf68Q9H3H3 251 aaKnown RBP1.74□□□□□ -2.13
VPS4B-203ENST00000588323 CBLN4Q9NTU7 201 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 ANAPC10Q9UM13 185 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 FUT9Q9Y231 359 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 MYH10P35580 1976 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
VPS4B-203ENST00000588323 RYR1P21817 5038 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 HYDINQ4G0P3 5121 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 TRPM6Q9BX84 2022 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 YLPM1P49750 1951 aaKnown RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 TRBV24-1A0A075B6N3 115 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 TRAV17A0A0B4J275 112 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 TRDV1A0A1B0GX56 115 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 LRCOL1A6NCL2 159 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 COLCA2A8K830 154 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 A8MWV9 139 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 TMEM262E9PQX1 116 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 G3V3Q6 166 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 H3BMG7 143 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 H3BQ85 93 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 RPL36A-HNRNPH2H7BZ11 118 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 OR2T1O43869 369 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 EDF1O60869 148 aaKnown RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 SH2D1AO60880 128 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 NAPSAO96009 420 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 MT-ND6P03923 174 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 CTSDP07339 412 aaPredicted RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 CD7P09564 240 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 LGALS3P17931 250 aaKnown RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 CCL1P22362 96 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 S100A4P26447 101 aaKnown RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 FGF12P61328 243 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 EIF4EBP1Q13541 118 aaPredicted RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 C10orf91Q5T1B1 145 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 C22orf39Q6P5X5 142 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 ALKAL2Q6UX46 152 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 IZUMO2Q6UXV1 221 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 SLC35E3Q7Z769 313 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 SLC22A24Q8N4F4 322 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 RPRMLQ8N4K4 120 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 BPIFB6Q8NFQ5 453 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 OR4B1Q8NGF8 309 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF431Q8TF32 576 aaPredicted RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 PATE1Q8WXA2 126 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 RAB37Q96AX2 223 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 GNPNAT1Q96EK6 184 aaPredicted RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 IGF2BP2-AS1Q96M15 143 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 RNF122Q9H9V4 155 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 AK3Q9UIJ7 227 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 LINC00588Q9Y4M8 146 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 AMMECR1Q9Y4X0 333 aaPredicted RBP1.73□□□□□ -2.13
VPS4B-203ENST00000588323 U3KQK5 164 aa1.73□□□□□ -2.13
VPS4B-203ENST00000588323 MDC1Q14676 2089 aaKnown RBP1.72□□□□□ -2.13
VPS4B-203ENST00000588323 TRAV27A0A087WT01 109 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 A0A087WXM4 84 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 TRAV13-1A0A0B4J241 112 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 TRAV4A0A0B4J268 109 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 A0A0J9YW62 118 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 TCRBV3S1A0A5B6 114 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 IRGMA1A4Y4 181 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 DPRXA6NFQ7 191 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 OR2T8A6NH00 312 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 H3BQ15 152 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 CCDC179H3BU77 68 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 J3QQQ9 107 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 APOC4-APOC2K7ER74 178 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 LECT2O14960 151 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 NDUFB3O43676 98 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 SLC25A20O43772 301 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 NCR2O95944 276 aa1.72□□□□□ -2.13
VPS4B-203ENST00000588323 TRACP01848 142 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms