RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 OR10AG1Q8NH19 301 aa8.18□□□□□ -1.1
VMP1-207ENST00000588131 C9orf85Q96MD7 179 aa8.18□□□□□ -1.1
VMP1-207ENST00000588131 SCRT2Q9NQ03 307 aa8.18□□□□□ -1.1
VMP1-207ENST00000588131 A0A1B0GXF2 115 aa8.17□□□□□ -1.1
VMP1-207ENST00000588131 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
VMP1-207ENST00000588131 GSN-AS1Q9NRJ2 163 aa8.17□□□□□ -1.1
VMP1-207ENST00000588131 MSRB1Q9NZV6 116 aa8.17□□□□□ -1.1
VMP1-207ENST00000588131 X6R8D5 127 aa8.17□□□□□ -1.1
VMP1-207ENST00000588131 A0A1B0GUT8 65 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 F2Z2F3 143 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 UBE2CO00762 179 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 RAB5AP20339 215 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 CAMPP49913 170 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 ZNF415Q09FC8 603 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 ATP5L2Q7Z4Y8 100 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 RNASE8Q8TDE3 154 aaKnown RBP8.16□□□□□ -1.1
VMP1-207ENST00000588131 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 BORCS7Q96B45 105 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 CNFNQ9BYD5 112 aa8.16□□□□□ -1.1
VMP1-207ENST00000588131 M0R381 172 aa8.15□□□□□ -1.1
VMP1-207ENST00000588131 NTF3P20783 257 aa8.15□□□□□ -1.1
VMP1-207ENST00000588131 CACNG7P62955 275 aa8.15□□□□□ -1.1
VMP1-207ENST00000588131 RIGQ13278 110 aa8.15□□□□□ -1.1
VMP1-207ENST00000588131 IL17DQ8TAD2 202 aa8.15□□□□□ -1.1
VMP1-207ENST00000588131 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.1
VMP1-207ENST00000588131 RCHY1Q96PM5 261 aa8.15□□□□□ -1.1
VMP1-207ENST00000588131 PHLDA3Q9Y5J5 127 aa8.15□□□□□ -1.1
VMP1-207ENST00000588131 IGHV4-4A0A075B6R2 117 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 PLAC8L1A1L4L8 177 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 NXPH4O95158 308 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 RPS10P46783 165 aaKnown RBP8.14□□□□□ -1.11
VMP1-207ENST00000588131 HBBP68871 147 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 TWIST1Q15672 202 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 SPANXN1Q5VSR9 72 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 WDR73Q6P4I2 378 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 TMEM136Q6ZRR5 245 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 Q6ZWC4 215 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 RNF183Q96D59 192 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 C16orf74Q96GX8 76 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 RETNQ9HD89 108 aa8.14□□□□□ -1.11
VMP1-207ENST00000588131 MUC4Q99102 2169 aa8.13□□□□□ -1.11
VMP1-207ENST00000588131 SNURFLB1AK76 121 aa8.13□□□□□ -1.11
VMP1-207ENST00000588131 RAB4BP61018 213 aa8.13□□□□□ -1.11
VMP1-207ENST00000588131 RASL11AQ6T310 242 aa8.13□□□□□ -1.11
VMP1-207ENST00000588131 ZFP82Q8N141 532 aa8.13□□□□□ -1.11
VMP1-207ENST00000588131 GATD1Q8NB37 220 aa8.13□□□□□ -1.11
VMP1-207ENST00000588131 OR11H2Q8NH07 326 aa8.13□□□□□ -1.11
VMP1-207ENST00000588131 A0A1B0GW15 77 aa8.12□□□□□ -1.11
VMP1-207ENST00000588131 DEFB121Q5J5C9 76 aa8.12□□□□□ -1.11
VMP1-207ENST00000588131 ZNF493Q6ZR52 646 aa8.12□□□□□ -1.11
VMP1-207ENST00000588131 SBSPONQ8IVN8 264 aa8.12□□□□□ -1.11
VMP1-207ENST00000588131 OVOL2Q9BRP0 275 aa8.12□□□□□ -1.11
VMP1-207ENST00000588131 GNB1LQ9BYB4 327 aa8.12□□□□□ -1.11
VMP1-207ENST00000588131 JPT2Q9H910 190 aa8.12□□□□□ -1.11
VMP1-207ENST00000588131 MRPL16Q9NX20 251 aaKnown RBP8.12□□□□□ -1.11
VMP1-207ENST00000588131 SMIM9A6NGZ8 99 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 M0R2P5 195 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 TRGC2P03986 189 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 EVI2AP22794 236 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 ZNF876PQ49A33 203 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 COX19Q49B96 90 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 SYT8Q8NBV8 401 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 SPXQ9BT56 116 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
VMP1-207ENST00000588131 TRAPPC1Q9Y5R8 145 aa8.11□□□□□ -1.11
VMP1-207ENST00000588131 IGHV4-28A0A0C4DH34 117 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 PHOX2AO14813 284 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 HLA-DQA1P01909 254 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 S100A8P05109 93 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 EMP1P54849 157 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 FABP9Q0Z7S8 132 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 SLAQ13239 276 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 AMN1Q8IY45 258 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 Q8NAQ8 132 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 MRAPQ8TCY5 172 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 FRZBQ92765 325 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 PTH2Q96A98 100 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 NOP10Q9NPE3 64 aaKnown RBP8.1□□□□□ -1.11
VMP1-207ENST00000588131 TP53TG1Q9Y2A0 90 aa8.1□□□□□ -1.11
VMP1-207ENST00000588131 DEFB4AO15263 64 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 MT-ND6P03923 174 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 TRGC1P0CF51 173 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 MIFP14174 115 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 DAZ2Q13117 558 aaKnown RBP8.09□□□□□ -1.11
VMP1-207ENST00000588131 Q6ZTI0 123 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 C14orf178Q8N769 122 aaPredicted RBP8.09□□□□□ -1.11
VMP1-207ENST00000588131 RNF185Q96GF1 192 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 AP1S3Q96PC3 154 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 SAMD10Q9BYL1 202 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 KIF25-AS1Q9Y6Z4 181 aa8.09□□□□□ -1.11
VMP1-207ENST00000588131 A0A087WWL8 130 aa8.08□□□□□ -1.12
VMP1-207ENST00000588131 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
VMP1-207ENST00000588131 APCSP02743 223 aa8.08□□□□□ -1.12
VMP1-207ENST00000588131 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
VMP1-207ENST00000588131 FAM104BQ5XKR9 115 aa8.08□□□□□ -1.12
VMP1-207ENST00000588131 RASL10AQ92737 203 aa8.08□□□□□ -1.12
VMP1-207ENST00000588131 TM2D3Q9BRN9 247 aa8.08□□□□□ -1.12
VMP1-207ENST00000588131 HUWE1Q7Z6Z7 4374 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms