RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 SPATA25Q9BR10 227 aa11.93□□□□□ -0.5
ERCC4-208ENST00000576348 A0A1B0GUT8 65 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 M0R381 172 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 RNASE3P12724 160 aaKnown RBP11.92□□□□□ -0.5
ERCC4-208ENST00000576348 MIFP14174 115 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 EMP1P54849 157 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 FOXA3P55318 350 aaPredicted RBP11.92□□□□□ -0.5
ERCC4-208ENST00000576348 DEFA6Q01524 100 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 MRPL54Q6P161 138 aaKnown RBP11.92□□□□□ -0.5
ERCC4-208ENST00000576348 SBSPONQ8IVN8 264 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 ZFP82Q8N141 532 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 SPXQ9BT56 116 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 RETNQ9HD89 108 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 X6R8D5 127 aa11.92□□□□□ -0.5
ERCC4-208ENST00000576348 SNAI2O43623 268 aa11.91□□□□□ -0.5
ERCC4-208ENST00000576348 S100A8P05109 93 aa11.91□□□□□ -0.5
ERCC4-208ENST00000576348 TWIST1Q15672 202 aa11.91□□□□□ -0.5
ERCC4-208ENST00000576348 RNASE8Q8TDE3 154 aaKnown RBP11.91□□□□□ -0.5
ERCC4-208ENST00000576348 C9orf85Q96MD7 179 aa11.91□□□□□ -0.5
ERCC4-208ENST00000576348 OVOL2Q9BRP0 275 aa11.91□□□□□ -0.5
ERCC4-208ENST00000576348 CMYA5Q8N3K9 4069 aa11.9□□□□□ -0.5
ERCC4-208ENST00000576348 IGHV4-28A0A0C4DH34 117 aa11.9□□□□□ -0.5
ERCC4-208ENST00000576348 M0R2P5 195 aa11.9□□□□□ -0.5
ERCC4-208ENST00000576348 SMIM15Q7Z3B0 74 aa11.9□□□□□ -0.5
ERCC4-208ENST00000576348 C11orf72Q8NBR9 251 aa11.9□□□□□ -0.5
ERCC4-208ENST00000576348 OR10AG1Q8NH19 301 aa11.9□□□□□ -0.5
ERCC4-208ENST00000576348 SSBP4Q9BWG4 385 aaPredicted RBP11.9□□□□□ -0.5
ERCC4-208ENST00000576348 ZMAT4Q9H898 229 aa11.9□□□□□ -0.5
ERCC4-208ENST00000576348 A0A1B0GW15 77 aa11.89□□□□□ -0.51
ERCC4-208ENST00000576348 ELOBQ15370 118 aa11.89□□□□□ -0.51
ERCC4-208ENST00000576348 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
ERCC4-208ENST00000576348 ATP5L2Q7Z4Y8 100 aa11.89□□□□□ -0.51
ERCC4-208ENST00000576348 ZNF575Q86XF7 245 aa11.89□□□□□ -0.51
ERCC4-208ENST00000576348 NOP10Q9NPE3 64 aaKnown RBP11.89□□□□□ -0.51
ERCC4-208ENST00000576348 SCRT2Q9NQ03 307 aa11.89□□□□□ -0.51
ERCC4-208ENST00000576348 TRGV1A0A0A0MS02 117 aa11.88□□□□□ -0.51
ERCC4-208ENST00000576348 TGIF2-C20orf24A0A0A6YYL0 155 aa11.88□□□□□ -0.51
ERCC4-208ENST00000576348 CAMPP49913 170 aa11.88□□□□□ -0.51
ERCC4-208ENST00000576348 RAB4BP61018 213 aa11.88□□□□□ -0.51
ERCC4-208ENST00000576348 HBBP68871 147 aa11.88□□□□□ -0.51
ERCC4-208ENST00000576348 ZNF876PQ49A33 203 aa11.88□□□□□ -0.51
ERCC4-208ENST00000576348 FAM210BQ96KR6 192 aa11.88□□□□□ -0.51
ERCC4-208ENST00000576348 TRGC1P0CF51 173 aa11.87□□□□□ -0.51
ERCC4-208ENST00000576348 NTF3P20783 257 aa11.87□□□□□ -0.51
ERCC4-208ENST00000576348 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
ERCC4-208ENST00000576348 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.87□□□□□ -0.51
ERCC4-208ENST00000576348 B9D2Q9BPU9 175 aa11.87□□□□□ -0.51
ERCC4-208ENST00000576348 MRPL16Q9NX20 251 aaKnown RBP11.87□□□□□ -0.51
ERCC4-208ENST00000576348 TRBV24-1A0A075B6N3 115 aa11.86□□□□□ -0.51
ERCC4-208ENST00000576348 DEFB4AO15263 64 aa11.86□□□□□ -0.51
ERCC4-208ENST00000576348 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
ERCC4-208ENST00000576348 COX19Q49B96 90 aa11.86□□□□□ -0.51
ERCC4-208ENST00000576348 AP1S3Q96PC3 154 aa11.86□□□□□ -0.51
ERCC4-208ENST00000576348 TM2D3Q9BRN9 247 aa11.86□□□□□ -0.51
ERCC4-208ENST00000576348 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
ERCC4-208ENST00000576348 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
ERCC4-208ENST00000576348 RASL11AQ6T310 242 aa11.85□□□□□ -0.51
ERCC4-208ENST00000576348 Q8NAQ8 132 aa11.85□□□□□ -0.51
ERCC4-208ENST00000576348 IGHV4-4A0A075B6R2 117 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 GAGE12BA1L429 117 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 LYRM9A8MSI8 78 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 GAGE7O76087 117 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 NXPH4O95158 308 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 GAGE12FP0CL80 117 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 GAGE12GP0CL81 117 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 GAGE12IP0CL82 117 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 LGALS9BQ3B8N2 356 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 IL17DQ8TAD2 202 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 PTH2Q96A98 100 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 MSRB1Q9NZV6 116 aa11.84□□□□□ -0.51
ERCC4-208ENST00000576348 TRGV2A0A075B6R0 118 aa11.83□□□□□ -0.52
ERCC4-208ENST00000576348 A0A1B0GXF2 115 aa11.83□□□□□ -0.52
ERCC4-208ENST00000576348 PLAC8L1A1L4L8 177 aa11.83□□□□□ -0.52
ERCC4-208ENST00000576348 SPART-AS1P0CW21 52 aa11.83□□□□□ -0.52
ERCC4-208ENST00000576348 PIK3CD-AS1Q5SR53 167 aa11.83□□□□□ -0.52
ERCC4-208ENST00000576348 Q6ZTI0 123 aa11.83□□□□□ -0.52
ERCC4-208ENST00000576348 NDUFAF3Q9BU61 184 aa11.83□□□□□ -0.52
ERCC4-208ENST00000576348 TEX48A0A1B0GUV7 120 aa11.82□□□□□ -0.52
ERCC4-208ENST00000576348 A8MWV9 139 aa11.82□□□□□ -0.52
ERCC4-208ENST00000576348 DEFB130BP0DP73 79 aa11.82□□□□□ -0.52
ERCC4-208ENST00000576348 DEFB130AP0DP74 79 aa11.82□□□□□ -0.52
ERCC4-208ENST00000576348 FAM222AQ5U5X8 452 aa11.82□□□□□ -0.52
ERCC4-208ENST00000576348 YPEL4Q96NS1 127 aa11.82□□□□□ -0.52
ERCC4-208ENST00000576348 DNAH3Q8TD57 4116 aa11.81□□□□□ -0.52
ERCC4-208ENST00000576348 COLCA2A8K830 154 aa11.81□□□□□ -0.52
ERCC4-208ENST00000576348 MGPP08493 103 aa11.81□□□□□ -0.52
ERCC4-208ENST00000576348 NHLRC4P0CG21 123 aaPredicted RBP11.81□□□□□ -0.52
ERCC4-208ENST00000576348 RPS10P46783 165 aaKnown RBP11.81□□□□□ -0.52
ERCC4-208ENST00000576348 FAM74A4Q5TZK3 123 aa11.81□□□□□ -0.52
ERCC4-208ENST00000576348 C14orf178Q8N769 122 aaPredicted RBP11.81□□□□□ -0.52
ERCC4-208ENST00000576348 RASL10AQ92737 203 aa11.81□□□□□ -0.52
ERCC4-208ENST00000576348 FRZBQ92765 325 aa11.81□□□□□ -0.52
ERCC4-208ENST00000576348 C11orf68Q9H3H3 251 aaKnown RBP11.81□□□□□ -0.52
ERCC4-208ENST00000576348 A0A087WWL8 130 aa11.8□□□□□ -0.52
ERCC4-208ENST00000576348 HLA-DQA1P01909 254 aa11.8□□□□□ -0.52
ERCC4-208ENST00000576348 MT-ND6P03923 174 aa11.8□□□□□ -0.52
ERCC4-208ENST00000576348 RAB5AP20339 215 aa11.8□□□□□ -0.52
ERCC4-208ENST00000576348 DAD1P61803 113 aa11.8□□□□□ -0.52
ERCC4-208ENST00000576348 OR4C5Q8NGB2 326 aa11.8□□□□□ -0.52
ERCC4-208ENST00000576348 TMEM191AQ9H0A3 160 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms