RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CTDSP1Q9GZU7 261 aa9.85□□□□□ -0.83
RPAIN-209ENST00000571558 TMEM242Q9NWH2 141 aa9.85□□□□□ -0.83
RPAIN-209ENST00000571558 X6R8D5 127 aa9.85□□□□□ -0.83
RPAIN-209ENST00000571558 GZMBP10144 247 aa9.84□□□□□ -0.83
RPAIN-209ENST00000571558 AZU1P20160 251 aa9.84□□□□□ -0.83
RPAIN-209ENST00000571558 RPS20P60866 119 aaKnown RBP9.84□□□□□ -0.83
RPAIN-209ENST00000571558 TSKUQ8WUA8 353 aa9.84□□□□□ -0.83
RPAIN-209ENST00000571558 GTSF1Q8WW33 167 aa9.84□□□□□ -0.83
RPAIN-209ENST00000571558 TMEM208Q9BTX3 173 aa9.84□□□□□ -0.83
RPAIN-209ENST00000571558 RPS10P5Q9NQ39 176 aa9.84□□□□□ -0.83
RPAIN-209ENST00000571558 IGHV3OR16-12A0A075B7B8 117 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 IGHV3-16A0A0C4DH30 117 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 SMIM27A0A1W2PRY6 76 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 GRIFINA4D1Z8 144 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 A8MWL6 223 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 C11orf72Q8NBR9 251 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 NEU1Q99519 415 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 MDFICQ9P1T7 246 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 VPS13DQ5THJ4 4388 aa9.83□□□□□ -0.84
RPAIN-209ENST00000571558 FAM231BA6NCW3 169 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 CBY3A6NI87 242 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 RNASE3P12724 160 aaKnown RBP9.82□□□□□ -0.84
RPAIN-209ENST00000571558 FOXA3P55318 350 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-209ENST00000571558 RNASE8Q8TDE3 154 aaKnown RBP9.82□□□□□ -0.84
RPAIN-209ENST00000571558 GFRA4Q9GZZ7 299 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 IL36BQ9NZH7 164 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 TRGV11A0A075B6L2 103 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 PLAC8L1A1L4L8 177 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 XKRY2A2RUG3 117 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 HTN1P15515 57 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 ASIPP42127 132 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 IMMP2LQ96T52 175 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 SSBP4Q9BWG4 385 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-209ENST00000571558 SCRT2Q9NQ03 307 aa9.82□□□□□ -0.84
RPAIN-209ENST00000571558 SMIM9A6NGZ8 99 aa9.81□□□□□ -0.84
RPAIN-209ENST00000571558 CTRLP40313 264 aa9.81□□□□□ -0.84
RPAIN-209ENST00000571558 OR11H2Q8NH07 326 aa9.81□□□□□ -0.84
RPAIN-209ENST00000571558 TMEM263Q8WUH6 116 aaKnown RBP9.81□□□□□ -0.84
RPAIN-209ENST00000571558 C9orf85Q96MD7 179 aa9.81□□□□□ -0.84
RPAIN-209ENST00000571558 A0A1W2PPQ1 181 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 HIGD1CA8MV81 97 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 SNAI2O43623 268 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 ARMS2P0C7Q2 107 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 TCL1AP56279 114 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 RRN3P1Q2M238 152 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 ZNF493Q6ZR52 646 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 Q8NAQ8 132 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 GSN-AS1Q9NRJ2 163 aa9.8□□□□□ -0.84
RPAIN-209ENST00000571558 H3BVH4 76 aa9.79□□□□□ -0.84
RPAIN-209ENST00000571558 OR5AL1P0C617 328 aa9.79□□□□□ -0.84
RPAIN-209ENST00000571558 LYZL1Q6UWQ5 148 aa9.79□□□□□ -0.84
RPAIN-209ENST00000571558 FER1L6-AS1Q8NA97 138 aa9.79□□□□□ -0.84
RPAIN-209ENST00000571558 C16orf74Q96GX8 76 aa9.79□□□□□ -0.84
RPAIN-209ENST00000571558 YPEL4Q96NS1 127 aa9.79□□□□□ -0.84
RPAIN-209ENST00000571558 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
RPAIN-209ENST00000571558 NAT8BQ9UHF3 227 aa9.79□□□□□ -0.84
RPAIN-209ENST00000571558 ABCA13Q86UQ4 5058 aa9.78□□□□□ -0.84
RPAIN-209ENST00000571558 MIFP14174 115 aa9.78□□□□□ -0.84
RPAIN-209ENST00000571558 S100A4P26447 101 aaKnown RBP9.78□□□□□ -0.84
RPAIN-209ENST00000571558 FAM3BP58499 235 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-209ENST00000571558 ZNF415Q09FC8 603 aa9.78□□□□□ -0.84
RPAIN-209ENST00000571558 CBLN2Q8IUK8 224 aa9.78□□□□□ -0.84
RPAIN-209ENST00000571558 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
RPAIN-209ENST00000571558 PKHD1P08F94 4074 aa9.77□□□□□ -0.84
RPAIN-209ENST00000571558 IGHV4-28A0A0C4DH34 117 aa9.77□□□□□ -0.85
RPAIN-209ENST00000571558 F2Z2F3 143 aa9.77□□□□□ -0.85
RPAIN-209ENST00000571558 SCO1O75880 301 aa9.77□□□□□ -0.85
RPAIN-209ENST00000571558 NXPH4O95158 308 aa9.77□□□□□ -0.85
RPAIN-209ENST00000571558 DAZ2Q13117 558 aaKnown RBP9.77□□□□□ -0.85
RPAIN-209ENST00000571558 TMEM88Q6PEY1 159 aa9.77□□□□□ -0.85
RPAIN-209ENST00000571558 OR10AG1Q8NH19 301 aa9.77□□□□□ -0.85
RPAIN-209ENST00000571558 PGLYRP4Q96LB8 373 aa9.77□□□□□ -0.85
RPAIN-209ENST00000571558 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
RPAIN-209ENST00000571558 C11orf68Q9H3H3 251 aaKnown RBP9.77□□□□□ -0.85
RPAIN-209ENST00000571558 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
RPAIN-209ENST00000571558 WDR73Q6P4I2 378 aa9.76□□□□□ -0.85
RPAIN-209ENST00000571558 PTH2Q96A98 100 aa9.76□□□□□ -0.85
RPAIN-209ENST00000571558 SPXQ9BT56 116 aa9.76□□□□□ -0.85
RPAIN-209ENST00000571558 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
RPAIN-209ENST00000571558 URGCP-MRPS24S4R325 110 aa9.76□□□□□ -0.85
RPAIN-209ENST00000571558 IGHV4-4A0A075B6R2 117 aa9.75□□□□□ -0.85
RPAIN-209ENST00000571558 TRAV9-1A0A075B6T8 112 aa9.75□□□□□ -0.85
RPAIN-209ENST00000571558 MUC21A0A0G2JKD1 596 aa9.75□□□□□ -0.85
RPAIN-209ENST00000571558 MUC21A0A140T8X8 626 aa9.75□□□□□ -0.85
RPAIN-209ENST00000571558 ELOBQ15370 118 aa9.75□□□□□ -0.85
RPAIN-209ENST00000571558 TIMM8BQ9Y5J9 83 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-209ENST00000571558 DNAH6Q9C0G6 4158 aa9.75□□□□□ -0.85
RPAIN-209ENST00000571558 A0A1B0GXF2 115 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 SNURFLB1AK76 121 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 SPINK4O60575 86 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 S100PP25815 95 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 KCNIP4Q6PIL6 250 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 APLNQ9ULZ1 77 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 PHLDA3Q9Y5J5 127 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 MUC4Q99102 2169 aa9.74□□□□□ -0.85
RPAIN-209ENST00000571558 A0A1B0GUT8 65 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 M0R2P5 195 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms