RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 PHLDA3Q9Y5J5 127 aa13.1□□□□□ -0.31
SPNS2-202ENST00000570641 TGIF2-C20orf24A0A0A6YYL0 155 aa13.09□□□□□ -0.31
SPNS2-202ENST00000570641 SPINK4O60575 86 aa13.09□□□□□ -0.31
SPNS2-202ENST00000570641 DEFB121Q5J5C9 76 aa13.09□□□□□ -0.31
SPNS2-202ENST00000570641 A0A1B0GW15 77 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 SPRY2O43597 315 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 PRM2P04554 102 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 AZU1P20160 251 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 MRPL54Q6P161 138 aaKnown RBP13.08□□□□□ -0.32
SPNS2-202ENST00000570641 C11orf72Q8NBR9 251 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 RNASE8Q8TDE3 154 aaKnown RBP13.08□□□□□ -0.32
SPNS2-202ENST00000570641 FAM210BQ96KR6 192 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 SPXQ9BT56 116 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 CNFNQ9BYD5 112 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 TP53TG1Q9Y2A0 90 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 NOTCH1P46531 2555 aa13.08□□□□□ -0.32
SPNS2-202ENST00000570641 COLCA2A8K830 154 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 S100A8P05109 93 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 COX19Q49B96 90 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 RASL11AQ6T310 242 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 ZFP82Q8N141 532 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 OR11H2Q8NH07 326 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 OR10AG1Q8NH19 301 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 GSN-AS1Q9NRJ2 163 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 X6R8D5 127 aa13.07□□□□□ -0.32
SPNS2-202ENST00000570641 IGHV4-4A0A075B6R2 117 aa13.06□□□□□ -0.32
SPNS2-202ENST00000570641 MUC21A0A0G2JKD1 596 aa13.06□□□□□ -0.32
SPNS2-202ENST00000570641 MUC21A0A140T8X8 626 aa13.06□□□□□ -0.32
SPNS2-202ENST00000570641 SNURFLB1AK76 121 aa13.06□□□□□ -0.32
SPNS2-202ENST00000570641 HBBP68871 147 aa13.06□□□□□ -0.32
SPNS2-202ENST00000570641 SYT8Q8NBV8 401 aa13.06□□□□□ -0.32
SPNS2-202ENST00000570641 MUC4Q99102 2169 aa13.05□□□□□ -0.32
SPNS2-202ENST00000570641 A0A1B0GXF2 115 aa13.05□□□□□ -0.32
SPNS2-202ENST00000570641 MIFP14174 115 aa13.05□□□□□ -0.32
SPNS2-202ENST00000570641 NTF3P20783 257 aa13.05□□□□□ -0.32
SPNS2-202ENST00000570641 SSTP61278 116 aa13.05□□□□□ -0.32
SPNS2-202ENST00000570641 TWIST1Q15672 202 aa13.05□□□□□ -0.32
SPNS2-202ENST00000570641 M0R2P5 195 aa13.04□□□□□ -0.32
SPNS2-202ENST00000570641 M0R381 172 aa13.04□□□□□ -0.32
SPNS2-202ENST00000570641 NXPH4O95158 308 aa13.04□□□□□ -0.32
SPNS2-202ENST00000570641 IL17DQ8TAD2 202 aa13.04□□□□□ -0.32
SPNS2-202ENST00000570641 MRAPQ8TCY5 172 aa13.04□□□□□ -0.32
SPNS2-202ENST00000570641 PTH2Q96A98 100 aa13.04□□□□□ -0.32
SPNS2-202ENST00000570641 DNAH3Q8TD57 4116 aa13.04□□□□□ -0.32
SPNS2-202ENST00000570641 CAMPP49913 170 aa13.03□□□□□ -0.32
SPNS2-202ENST00000570641 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
SPNS2-202ENST00000570641 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.03□□□□□ -0.32
SPNS2-202ENST00000570641 OVOL2Q9BRP0 275 aa13.03□□□□□ -0.32
SPNS2-202ENST00000570641 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
SPNS2-202ENST00000570641 RAB5AP20339 215 aa13.02□□□□□ -0.33
SPNS2-202ENST00000570641 DAZ2Q13117 558 aaKnown RBP13.02□□□□□ -0.33
SPNS2-202ENST00000570641 SMIM15Q7Z3B0 74 aa13.02□□□□□ -0.33
SPNS2-202ENST00000570641 SBSPONQ8IVN8 264 aa13.02□□□□□ -0.33
SPNS2-202ENST00000570641 PLAC8L1A1L4L8 177 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 MT-ND6P03923 174 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 RAB4BP61018 213 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 DMRTA1Q5VZB9 504 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 GATD1Q8NB37 220 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 SPATA25Q9BR10 227 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 NDUFAF3Q9BU61 184 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 GNB1LQ9BYB4 327 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 MSRB1Q9NZV6 116 aa13.01□□□□□ -0.33
SPNS2-202ENST00000570641 IGHV4-28A0A0C4DH34 117 aa13□□□□□ -0.33
SPNS2-202ENST00000570641 HLA-DQA1P01909 254 aa13□□□□□ -0.33
SPNS2-202ENST00000570641 RPS10P46783 165 aaKnown RBP13□□□□□ -0.33
SPNS2-202ENST00000570641 LGALS9BQ3B8N2 356 aa13□□□□□ -0.33
SPNS2-202ENST00000570641 TMEM136Q6ZRR5 245 aa13□□□□□ -0.33
SPNS2-202ENST00000570641 AP1S3Q96PC3 154 aa13□□□□□ -0.33
SPNS2-202ENST00000570641 RETNQ9HD89 108 aa13□□□□□ -0.33
SPNS2-202ENST00000570641 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
SPNS2-202ENST00000570641 TGP01266 2768 aa13□□□□□ -0.33
SPNS2-202ENST00000570641 Q8NAQ8 132 aa12.99□□□□□ -0.33
SPNS2-202ENST00000570641 TMEM191AQ9H0A3 160 aa12.99□□□□□ -0.33
SPNS2-202ENST00000570641 MRPL16Q9NX20 251 aaKnown RBP12.99□□□□□ -0.33
SPNS2-202ENST00000570641 TRGV1A0A0A0MS02 117 aa12.98□□□□□ -0.33
SPNS2-202ENST00000570641 RASL10AQ92737 203 aa12.98□□□□□ -0.33
SPNS2-202ENST00000570641 TM2D3Q9BRN9 247 aa12.98□□□□□ -0.33
SPNS2-202ENST00000570641 TRAPPC1Q9Y5R8 145 aa12.98□□□□□ -0.33
SPNS2-202ENST00000570641 A8MWV9 139 aa12.97□□□□□ -0.33
SPNS2-202ENST00000570641 SMIM17P0DL12 118 aa12.97□□□□□ -0.33
SPNS2-202ENST00000570641 EMP1P54849 157 aa12.97□□□□□ -0.33
SPNS2-202ENST00000570641 DPH3P1Q9H4G8 78 aa12.97□□□□□ -0.33
SPNS2-202ENST00000570641 LYRM9A8MSI8 78 aa12.96□□□□□ -0.33
SPNS2-202ENST00000570641 FRZBQ92765 325 aa12.96□□□□□ -0.33
SPNS2-202ENST00000570641 B9D2Q9BPU9 175 aa12.96□□□□□ -0.33
SPNS2-202ENST00000570641 MRPL18Q9H0U6 180 aaKnown RBP12.96□□□□□ -0.33
SPNS2-202ENST00000570641 ZMAT4Q9H898 229 aa12.96□□□□□ -0.33
SPNS2-202ENST00000570641 APCSP02743 223 aa12.95□□□□□ -0.34
SPNS2-202ENST00000570641 EVI2AP22794 236 aa12.95□□□□□ -0.34
SPNS2-202ENST00000570641 DEFA6Q01524 100 aa12.95□□□□□ -0.34
SPNS2-202ENST00000570641 Q6ZTI0 123 aa12.95□□□□□ -0.34
SPNS2-202ENST00000570641 RS1O15537 224 aa12.94□□□□□ -0.34
SPNS2-202ENST00000570641 FAM104BQ5XKR9 115 aa12.94□□□□□ -0.34
SPNS2-202ENST00000570641 C14orf178Q8N769 122 aaPredicted RBP12.94□□□□□ -0.34
SPNS2-202ENST00000570641 JPT2Q9H910 190 aa12.94□□□□□ -0.34
SPNS2-202ENST00000570641 TEX48A0A1B0GUV7 120 aa12.93□□□□□ -0.34
SPNS2-202ENST00000570641 GAGE12BA1L429 117 aa12.93□□□□□ -0.34
SPNS2-202ENST00000570641 DEFB4AO15263 64 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms