RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TEX48A0A1B0GUV7 120 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 HIGD1CA8MV81 97 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 PLA2G1BP04054 148 aaKnown RBP4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 SPANXN1Q5VSR9 72 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 Q6ZQT7 251 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 SBSPONQ8IVN8 264 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 ZFP82Q8N141 532 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 NEU1Q99519 415 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 B9D2Q9BPU9 175 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 GFRA4Q9GZZ7 299 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 IL36BQ9NZH7 164 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 C11orf21Q9P2W6 132 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 TP53TG3Q9ULZ0 132 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 V9GYV3 84 aa4.77□□□□□ -1.65
CTDNEP1-204ENST00000570484 IGHV3-16A0A0C4DH30 117 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 IGHV4-28A0A0C4DH34 117 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 FAM231BA6NCW3 169 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 F2Z2F3 143 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 M0R381 172 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 GNRH2O43555 120 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 S100A8P05109 93 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 ARMS2P0C7Q2 107 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 GZMBP10144 247 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 CACNG7P62955 275 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 SMIM15Q7Z3B0 74 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 RNASE8Q8TDE3 154 aaKnown RBP4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 BTF3L4Q96K17 158 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 PGLYRP4Q96LB8 373 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 AP1S3Q96PC3 154 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 TM2D3Q9BRN9 247 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 OVOL2Q9BRP0 275 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 SPXQ9BT56 116 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 C11orf68Q9H3H3 251 aaKnown RBP4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 GSN-AS1Q9NRJ2 163 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 TMEM242Q9NWH2 141 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 URGCP-MRPS24S4R325 110 aa4.76□□□□□ -1.65
CTDNEP1-204ENST00000570484 TRGV2A0A075B6R0 118 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 TRGV1A0A0A0MS02 117 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 A0A1B0GUT8 65 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 SMIM27A0A1W2PRY6 76 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 CXorf65A6NEN9 183 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 M0R2P5 195 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 OR5AL1P0C617 328 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 TRGC1P0CF51 173 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 NHLRC4P0CG21 123 aaPredicted RBP4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 SMIM17P0DL12 118 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 CTRLP40313 264 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 RIGQ13278 110 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 DNLZQ5SXM8 178 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 LYZL1Q6UWQ5 148 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 OR10AG1Q8NH19 301 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 C9orf85Q96MD7 179 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 IMMP2LQ96T52 175 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 NOP10Q9NPE3 64 aaKnown RBP4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 SMCO4Q9NRQ5 59 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 MRPL16Q9NX20 251 aaKnown RBP4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 MDFICQ9P1T7 246 aa4.75□□□□□ -1.65
CTDNEP1-204ENST00000570484 DNHD1Q96M86 4753 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 TRAV9-1A0A075B6T8 112 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 MUC21A0A0G2JKD1 596 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 MUC21A0A140T8X8 626 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 A0A1B0GW15 77 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 LYRM9A8MSI8 78 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 DEFB4AO15263 64 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 SNAI2O43623 268 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 SPINK4O60575 86 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 PRM2P04554 102 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 IGLC6P0CF74 106 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 RNASE3P12724 160 aaKnown RBP4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 AZU1P20160 251 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 LINC00310P59036 64 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 RAB4BP61018 213 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 SSTP61278 116 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 DAD1P61803 113 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 HBBP68871 147 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 TWIST1Q15672 202 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 ZNF876PQ49A33 203 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 MRPL54Q6P161 138 aaKnown RBP4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 TMEM88Q6PEY1 159 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 ATP5L2Q7Z4Y8 100 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 CBLN2Q8IUK8 224 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 Q8NAQ8 132 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 C11orf72Q8NBR9 251 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 NUP35Q8NFH5 326 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 GTSF1Q8WW33 167 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 NDUFAF3Q9BU61 184 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 MGAM2Q2M2H8 2515 aa4.74□□□□□ -1.65
CTDNEP1-204ENST00000570484 A0A0J9YWU9 116 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 GAGE12BA1L429 117 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 A8MWV9 139 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 RHODO00212 210 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 GAGE7O76087 117 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 MGPP08493 103 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 GAGE12FP0CL80 117 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 GAGE12GP0CL81 117 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 GAGE12IP0CL82 117 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 SPART-AS1P0CW21 52 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 DEFB130BP0DP73 79 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 DEFB130AP0DP74 79 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms