RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 TP53TG1Q9Y2A0 90 aa11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 TRAV9-1A0A075B6T8 112 aa11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 SMIM9A6NGZ8 99 aa11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 F2Z2F3 143 aa11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 SSTP61278 116 aa11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 ZNF493Q6ZR52 646 aa11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 OR10AG1Q8NH19 301 aa11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 BTF3L4Q96K17 158 aa11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 SSBP4Q9BWG4 385 aaPredicted RBP11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 PRKDCP78527 4128 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-219ENST00000570273 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
HERPUD1-219ENST00000570273 SNURFLB1AK76 121 aa11.11□□□□□ -0.63
HERPUD1-219ENST00000570273 ELOBQ15370 118 aa11.11□□□□□ -0.63
HERPUD1-219ENST00000570273 SPANXN1Q5VSR9 72 aa11.11□□□□□ -0.63
HERPUD1-219ENST00000570273 SCRT2Q9NQ03 307 aa11.11□□□□□ -0.63
HERPUD1-219ENST00000570273 TGIF2-C20orf24A0A0A6YYL0 155 aa11.1□□□□□ -0.63
HERPUD1-219ENST00000570273 M0R381 172 aa11.1□□□□□ -0.63
HERPUD1-219ENST00000570273 MIFP14174 115 aa11.1□□□□□ -0.63
HERPUD1-219ENST00000570273 CACNG7P62955 275 aa11.1□□□□□ -0.63
HERPUD1-219ENST00000570273 DEFA6Q01524 100 aa11.1□□□□□ -0.63
HERPUD1-219ENST00000570273 SPATA25Q9BR10 227 aa11.1□□□□□ -0.63
HERPUD1-219ENST00000570273 SPXQ9BT56 116 aa11.1□□□□□ -0.63
HERPUD1-219ENST00000570273 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 EMP1P54849 157 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 RIGQ13278 110 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 ZFP82Q8N141 532 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 SYT8Q8NBV8 401 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 IL17DQ8TAD2 202 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 YPEL4Q96NS1 127 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 M0R2P5 195 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 TWIST1Q15672 202 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 ATP5L2Q7Z4Y8 100 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 CNFNQ9BYD5 112 aa11.09□□□□□ -0.63
HERPUD1-219ENST00000570273 TRBV24-1A0A075B6N3 115 aa11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 NXPH4O95158 308 aa11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 HBBP68871 147 aa11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 WDR73Q6P4I2 378 aa11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 Q8NAQ8 132 aa11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 FAM210BQ96KR6 192 aa11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 MRPL16Q9NX20 251 aaKnown RBP11.08□□□□□ -0.64
HERPUD1-219ENST00000570273 A0A1B0GW15 77 aa11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 A0A1B0GXF2 115 aa11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 NTF3P20783 257 aa11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 CAMPP49913 170 aa11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 DAZ2Q13117 558 aaKnown RBP11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 ZNF876PQ49A33 203 aa11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 MSRB1Q9NZV6 116 aa11.07□□□□□ -0.64
HERPUD1-219ENST00000570273 IGHV4-4A0A075B6R2 117 aa11.06□□□□□ -0.64
HERPUD1-219ENST00000570273 TRGV1A0A0A0MS02 117 aa11.06□□□□□ -0.64
HERPUD1-219ENST00000570273 DEFB4AO15263 64 aa11.06□□□□□ -0.64
HERPUD1-219ENST00000570273 S100A8P05109 93 aa11.06□□□□□ -0.64
HERPUD1-219ENST00000570273 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.06□□□□□ -0.64
HERPUD1-219ENST00000570273 TRGC1P0CF51 173 aa11.05□□□□□ -0.64
HERPUD1-219ENST00000570273 RAB4BP61018 213 aa11.05□□□□□ -0.64
HERPUD1-219ENST00000570273 PTH2Q96A98 100 aa11.05□□□□□ -0.64
HERPUD1-219ENST00000570273 AP1S3Q96PC3 154 aa11.05□□□□□ -0.64
HERPUD1-219ENST00000570273 ZMAT4Q9H898 229 aa11.05□□□□□ -0.64
HERPUD1-219ENST00000570273 COLCA2A8K830 154 aa11.04□□□□□ -0.64
HERPUD1-219ENST00000570273 RASL11AQ6T310 242 aa11.04□□□□□ -0.64
HERPUD1-219ENST00000570273 Q6ZTI0 123 aa11.04□□□□□ -0.64
HERPUD1-219ENST00000570273 SMIM15Q7Z3B0 74 aa11.04□□□□□ -0.64
HERPUD1-219ENST00000570273 LGALS9BQ3B8N2 356 aa11.03□□□□□ -0.64
HERPUD1-219ENST00000570273 PIK3CD-AS1Q5SR53 167 aa11.03□□□□□ -0.64
HERPUD1-219ENST00000570273 NBEAL2Q6ZNJ1 2754 aa11.03□□□□□ -0.64
HERPUD1-219ENST00000570273 GAGE12BA1L429 117 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 LYRM9A8MSI8 78 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 GAGE7O76087 117 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 GAGE12FP0CL80 117 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 GAGE12GP0CL81 117 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 GAGE12IP0CL82 117 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 COX19Q49B96 90 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 RASL10AQ92737 203 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 C11orf68Q9H3H3 251 aaKnown RBP11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 JPT2Q9H910 190 aa11.02□□□□□ -0.64
HERPUD1-219ENST00000570273 SMIM17P0DL12 118 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 RAB5AP20339 215 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 TMEM136Q6ZRR5 245 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 NDUFAF3Q9BU61 184 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 TMEM191AQ9H0A3 160 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 MUC4Q99102 2169 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 A0A087WWL8 130 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 A8MWV9 139 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 HLA-DQA1P01909 254 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 DEFB130BP0DP73 79 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 DEFB130AP0DP74 79 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 EVI2AP22794 236 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 RPS10P46783 165 aaKnown RBP11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms