RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	PLAC4	Q8WY50	150 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	VPS25	Q9BRG1	176 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	ATG5	Q9H1Y0	275 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	GSKIP	Q9P0R6	139 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	COMMD3	Q9UBI1	195 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	ZCCHC6	Q5VYS8	1495 aa	Known RBP	0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	KIF13A	Q9H1H9	1805 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	MDN1	Q9NU22	5596 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	KIAA0100	Q14667	2235 aa	Known RBP	0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	PLXNA1	Q9UIW2	1896 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	BCORL1	Q5H9F3	1711 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	ABCA4	P78363	2273 aa		0.33	□□□□□ -2.36
BBS4-215	ENST00000569001	CPD	O75976	1380 aa		0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	AKAP11	Q9UKA4	1901 aa		0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	TEX49	A0A1B0GTD5	131 aa		0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	POLR2J	P52435	117 aa	Known RBP	0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	CKS1B	P61024	79 aa		0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	RPL37	P61927	97 aa	Known RBP	0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	LINC00208	Q96KT6	92 aa		0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	PTPRM	P28827	1452 aa		0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	KCP	Q6ZWJ8	1503 aa		0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	KMT2D	O14686	5537 aa		0.32	□□□□□ -2.36
BBS4-215	ENST00000569001	MYH6	P13533	1939 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001		A0A096LNT2	108 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	LOC101927531	A0A1B0GV80	90 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	CCDC179	H3BU77	68 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	IGKC	P01834	107 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	CCK	P06307	115 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	IGLC6	P0CF74	106 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	ZNF137P	P52743	207 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	HIST1H1A	Q02539	215 aa	Predicted RBP	0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	SPATA8	Q6RVD6	105 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	DYNLRB2	Q8TF09	96 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	SAR1A	Q9NR31	198 aa		0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	PAIP2B	Q9ULR5	123 aa	Known RBP	0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	LSM2	Q9Y333	95 aa	Known RBP	0.31	□□□□□ -2.36
BBS4-215	ENST00000569001	NOP16	Q9Y3C1	178 aa	Known RBP	0.31	□□□□□ -2.36
BBS4-215	ENST00000569001		J3QLW9	94 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	IL7	P13232	177 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	NCS1	P62166	190 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	SMCO1	Q147U7	214 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	SMIM21	Q3B7S5	101 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	CLLU1	Q5K131	121 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	OR2T2	Q6IF00	324 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	UNQ5815/PRO19632	Q6UWF5	114 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001		Q86TA4	180 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	SNX29P2	Q8IUI4	249 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	MAFIP	Q8WZ33	124 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	COPZ2	Q9P299	210 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	ERG28	Q9UKR5	140 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	SYNJ1	O43426	1573 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	TMEM2	Q9UHN6	1383 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	MYOM3	Q5VTT5	1437 aa		0.3	□□□□□ -2.36
BBS4-215	ENST00000569001	ERCC6	Q03468	1493 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	TANC1	Q9C0D5	1861 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	ABCA1	O95477	2261 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	TRAV12-2	A0A075B6T6	113 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	MCRIP1	C9JLW8	97 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	SPINT3	P49223	89 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	S100A12	P80511	92 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	ZNF56	Q15929	161 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	CTAGE3P	Q8IX95	158 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	PPP1R1C	Q8WVI7	109 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	LZIC	Q8WZA0	190 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	TMEM14B	Q9NUH8	114 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	PLAC8	Q9NZF1	115 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	APC	P25054	2843 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	LOC285556	D6RIA3	1793 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	GRIN2A	Q12879	1464 aa		0.29	□□□□□ -2.36
BBS4-215	ENST00000569001	BICRA	Q9NZM4	1560 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	PCLO	Q9Y6V0	5065 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	MED13L	Q71F56	2210 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	FAM236A	A0A1B0GUQ0	79 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	FAM236B	A0A1B0GV22	79 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	PHGR1	C9JFL3	82 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001		J3QR89	54 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001		M0R2Z0	102 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	PITX3	O75364	302 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	APOC1	P02654	83 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	LINC00694	P0DN24	101 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	PYY	P10082	97 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	SLC25A6	P12236	298 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	EMX2	Q04743	252 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	C6orf52	Q5T4I8	152 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	LINC01545	Q5VT33	79 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	SCIMP	Q6UWF3	145 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	VSTM2A	Q8TAG5	236 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	FAM103A1	Q9BTL3	118 aa	Known RBP	0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	SMIM3	Q9BZL3	60 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	TPT1P8	Q9HAU6	139 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	BET1L	Q9NYM9	111 aa		0.28	□□□□□ -2.36
BBS4-215	ENST00000569001	KDM6B	O15054	1643 aa		0.27	□□□□□ -2.37
BBS4-215	ENST00000569001	NAV3	Q8IVL0	2385 aa		0.27	□□□□□ -2.37
BBS4-215	ENST00000569001	RBBP6	Q7Z6E9	1792 aa	Known RBP	0.27	□□□□□ -2.37
BBS4-215	ENST00000569001	PHIP	Q8WWQ0	1821 aa		0.27	□□□□□ -2.37
BBS4-215	ENST00000569001	TRAV17	A0A0B4J275	112 aa		0.27	□□□□□ -2.37
BBS4-215	ENST00000569001	ZNF670-ZNF695	F2Z2N8	137 aa		0.27	□□□□□ -2.37
BBS4-215	ENST00000569001	NPFF	O15130	113 aa		0.27	□□□□□ -2.37
BBS4-215	ENST00000569001	LY6G6C	O95867	125 aa		0.27	□□□□□ -2.37
BBS4-215	ENST00000569001	IFI27L1	Q96BM0	104 aa		0.27	□□□□□ -2.37

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