RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NAGKQ9UJ70 344 aa12.09□□□□□ -0.47
TPM1-219ENST00000559397 IGHV4-4A0A075B6R2 117 aa12.08□□□□□ -0.48
TPM1-219ENST00000559397 TRAV12-3A0A0B4J271 114 aa12.08□□□□□ -0.48
TPM1-219ENST00000559397 IFITM10A6NMD0 228 aa12.08□□□□□ -0.48
TPM1-219ENST00000559397 SRIP30626 198 aa12.08□□□□□ -0.48
TPM1-219ENST00000559397 MUC21Q5SSG8 566 aa12.08□□□□□ -0.48
TPM1-219ENST00000559397 TP53TG3Q9ULZ0 132 aa12.08□□□□□ -0.48
TPM1-219ENST00000559397 MEGF8Q7Z7M0 2845 aa12.08□□□□□ -0.48
TPM1-219ENST00000559397 MUC21A0A0G2JKD1 596 aa12.07□□□□□ -0.48
TPM1-219ENST00000559397 MUC21A0A140T8X8 626 aa12.07□□□□□ -0.48
TPM1-219ENST00000559397 NTF3P20783 257 aa12.07□□□□□ -0.48
TPM1-219ENST00000559397 DEFA6Q01524 100 aa12.07□□□□□ -0.48
TPM1-219ENST00000559397 OR10J3Q5JRS4 329 aa12.07□□□□□ -0.48
TPM1-219ENST00000559397 ALKBH7Q9BT30 221 aaPredicted RBP12.07□□□□□ -0.48
TPM1-219ENST00000559397 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
TPM1-219ENST00000559397 TRAV12-2A0A075B6T6 113 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 CRXO43186 299 aaPredicted RBP12.06□□□□□ -0.48
TPM1-219ENST00000559397 ASIPP42127 132 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 CACNG7P62955 275 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 TWIST1Q15672 202 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 KCNS1Q96KK3 526 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 GIG44P09565 113 aaPredicted RBP12.06□□□□□ -0.48
TPM1-219ENST00000559397 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 FAM159AQ6UWV7 190 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 OR10AG1Q8NH19 301 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 MRAPQ8TCY5 172 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 MSRB1Q9NZV6 116 aa12.06□□□□□ -0.48
TPM1-219ENST00000559397 KIR2DL5BA0A0G2JN68 375 aa12.05□□□□□ -0.48
TPM1-219ENST00000559397 KIR2DL5BA0A0G2JPC4 375 aa12.05□□□□□ -0.48
TPM1-219ENST00000559397 H3BVH4 76 aa12.05□□□□□ -0.48
TPM1-219ENST00000559397 GNRH2O43555 120 aa12.05□□□□□ -0.48
TPM1-219ENST00000559397 RNASE3P12724 160 aaKnown RBP12.05□□□□□ -0.48
TPM1-219ENST00000559397 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
TPM1-219ENST00000559397 MORN3Q6PF18 240 aaPredicted RBP12.05□□□□□ -0.48
TPM1-219ENST00000559397 KIR2DL5AQ8N109 375 aa12.05□□□□□ -0.48
TPM1-219ENST00000559397 KIR2DL5BQ8NHK3 375 aa12.05□□□□□ -0.48
TPM1-219ENST00000559397 CSTL1Q9H114 145 aa12.05□□□□□ -0.48
TPM1-219ENST00000559397 ESDP10768 282 aa12.04□□□□□ -0.48
TPM1-219ENST00000559397 FXYD7P58549 80 aa12.04□□□□□ -0.48
TPM1-219ENST00000559397 LINC00310P59036 64 aa12.04□□□□□ -0.48
TPM1-219ENST00000559397 SSTP61278 116 aa12.04□□□□□ -0.48
TPM1-219ENST00000559397 TMEM256Q8N2U0 113 aa12.04□□□□□ -0.48
TPM1-219ENST00000559397 C18orf32Q8TCD1 76 aa12.04□□□□□ -0.48
TPM1-219ENST00000559397 APOC4P55056 127 aa12.03□□□□□ -0.48
TPM1-219ENST00000559397 NUTF2P61970 127 aaKnown RBP12.03□□□□□ -0.48
TPM1-219ENST00000559397 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
TPM1-219ENST00000559397 RBMY1A1P0DJD3 496 aaKnown RBP12.03□□□□□ -0.48
TPM1-219ENST00000559397 RBMY1CP0DJD4 496 aa12.03□□□□□ -0.48
TPM1-219ENST00000559397 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
TPM1-219ENST00000559397 RBMY1FQ15415 496 aaKnown RBP12.03□□□□□ -0.48
TPM1-219ENST00000559397 U3KQK5 164 aa12.03□□□□□ -0.48
TPM1-219ENST00000559397 NUPR1O60356 82 aa12.02□□□□□ -0.49
TPM1-219ENST00000559397 NXPH4O95158 308 aa12.02□□□□□ -0.49
TPM1-219ENST00000559397 AKR1D1P51857 326 aa12.02□□□□□ -0.49
TPM1-219ENST00000559397 PDZD11Q5EBL8 140 aa12.02□□□□□ -0.49
TPM1-219ENST00000559397 BAGE3Q86Y29 109 aa12.02□□□□□ -0.49
TPM1-219ENST00000559397 AMN1Q8IY45 258 aa12.02□□□□□ -0.49
TPM1-219ENST00000559397 HIST1H2BLQ99880 126 aa12.02□□□□□ -0.49
TPM1-219ENST00000559397 IGHV3-16A0A0C4DH30 117 aa12.01□□□□□ -0.49
TPM1-219ENST00000559397 SERF1AO75920 110 aa12.01□□□□□ -0.49
TPM1-219ENST00000559397 AMBPP02760 352 aa12.01□□□□□ -0.49
TPM1-219ENST00000559397 SPANXN1Q5VSR9 72 aa12.01□□□□□ -0.49
TPM1-219ENST00000559397 CSNK1G2-AS1Q8NCQ2 148 aa12.01□□□□□ -0.49
TPM1-219ENST00000559397 RNF185Q96GF1 192 aa12.01□□□□□ -0.49
TPM1-219ENST00000559397 XCL2Q9UBD3 114 aa12.01□□□□□ -0.49
TPM1-219ENST00000559397 S100A2P29034 98 aa12□□□□□ -0.49
TPM1-219ENST00000559397 MRPL51Q4U2R6 128 aaKnown RBP12□□□□□ -0.49
TPM1-219ENST00000559397 C9orf85Q96MD7 179 aa12□□□□□ -0.49
TPM1-219ENST00000559397 C20orf144Q9BQM9 153 aa12□□□□□ -0.49
TPM1-219ENST00000559397 RAB4AP20338 218 aa12□□□□□ -0.49
TPM1-219ENST00000559397 IQCJQ1A5X6 159 aa12□□□□□ -0.49
TPM1-219ENST00000559397 SBSPONQ8IVN8 264 aa12□□□□□ -0.49
TPM1-219ENST00000559397 LINC00467Q9BRT7 94 aa12□□□□□ -0.49
TPM1-219ENST00000559397 PHLDA3Q9Y5J5 127 aa12□□□□□ -0.49
TPM1-219ENST00000559397 TIMM8BQ9Y5J9 83 aaPredicted RBP12□□□□□ -0.49
TPM1-219ENST00000559397 RCHY1Q96PM5 261 aa11.99□□□□□ -0.49
TPM1-219ENST00000559397 C1QTNF4Q9BXJ3 329 aa11.99□□□□□ -0.49
TPM1-219ENST00000559397 MUC4Q99102 2169 aa11.99□□□□□ -0.49
TPM1-219ENST00000559397 FABP4P15090 132 aa11.98□□□□□ -0.49
TPM1-219ENST00000559397 EVI2AP22794 236 aa11.98□□□□□ -0.49
TPM1-219ENST00000559397 Q6ZWC4 215 aa11.98□□□□□ -0.49
TPM1-219ENST00000559397 TRGV11A0A075B6L2 103 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 SPRY2O43597 315 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 INSP01308 110 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 SMIM15Q7Z3B0 74 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 ORMDL3Q8N138 153 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 TMEM18Q96B42 140 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 D6R8Y8 96 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 M0R381 172 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 DEFB135Q30KP9 77 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 C1orf158Q8N1D5 194 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
TPM1-219ENST00000559397 B9D2Q9BPU9 175 aa11.97□□□□□ -0.49
TPM1-219ENST00000559397 NBEAL2Q6ZNJ1 2754 aa11.96□□□□□ -0.49
TPM1-219ENST00000559397 PPBPP02775 128 aa11.96□□□□□ -0.5
TPM1-219ENST00000559397 OR10D4PQ8NGN7 298 aa11.96□□□□□ -0.5
TPM1-219ENST00000559397 URB1-AS1Q96HZ7 61 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms