RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 LINC00313P59037 77 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 CCL20P78556 96 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 ZNF816Q0VGE8 651 aaPredicted RBP2.7□□□□□ -1.98
PDE8A-209ENST00000558543 CIRBPQ14011 172 aaKnown RBP2.7□□□□□ -1.98
PDE8A-209ENST00000558543 ZNF56Q15929 161 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 LINC00483Q53H64 154 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 FAM104BQ5XKR9 115 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 C7orf65Q6ZTY9 151 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 SCXQ7RTU7 201 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 CHCHD1Q96BP2 118 aaKnown RBP2.7□□□□□ -1.98
PDE8A-209ENST00000558543 NPCDR1Q9BY65 106 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 CMC2Q9NRP2 79 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 TAS2R4Q9NYW5 299 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 LINC00588Q9Y4M8 146 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 HILPDAQ9Y5L2 63 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 USP32Q8NFA0 1604 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 C2orf16Q68DN1 1984 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 FMN2Q9NZ56 1722 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 DOCK8Q8NF50 2099 aa2.7□□□□□ -1.98
PDE8A-209ENST00000558543 HEATR5AQ86XA9 2040 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 RGPD8O14715 1765 aaPredicted RBP2.69□□□□□ -1.98
PDE8A-209ENST00000558543 RGPD5Q99666 1765 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 DOCK4Q8N1I0 1966 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 DOCK9Q9BZ29 2069 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 IGKV1-6A0A0C4DH72 117 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 IGKV1-39P01597 117 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 IGKV1D-39P04432 117 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 PRM2P04554 102 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 GCHFRP30047 84 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 FUSP35637 526 aaKnown RBP eCLIP2.69□□□□□ -1.98
PDE8A-209ENST00000558543 HIST1H4AP62805 103 aaKnown RBP2.69□□□□□ -1.98
PDE8A-209ENST00000558543 RPL30P62888 115 aaKnown RBP2.69□□□□□ -1.98
PDE8A-209ENST00000558543 BLCAPP62952 87 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 ATP11AUNQ6ZP68 121 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 FP248Q71RG6 208 aaPredicted RBP2.69□□□□□ -1.98
PDE8A-209ENST00000558543 SPANXA2-OT1Q8N9U9 137 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 DIRC1Q969H9 104 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 UPK3BQ9BT76 320 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 SND1-IT1Q9HBX3 110 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 MED12LQ86YW9 2145 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 RGPD2P0DJD1 1756 aa2.69□□□□□ -1.98
PDE8A-209ENST00000558543 ZFC3H1O60293 1989 aaKnown RBP2.69□□□□□ -1.98
PDE8A-209ENST00000558543 COL16A1Q07092 1604 aaPredicted RBP2.68□□□□□ -1.98
PDE8A-209ENST00000558543 PHRF1Q9P1Y6 1649 aaKnown RBP2.68□□□□□ -1.98
PDE8A-209ENST00000558543 CRYBG1Q9Y4K1 1723 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 AFDNP55196 1824 aaKnown RBP2.68□□□□□ -1.98
PDE8A-209ENST00000558543 MIA3Q5JRA6 1907 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 IGKV1D-43A0A0B4J1Z2 117 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 CRYM-AS1A6NIL9 109 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 C2orf70A6NJV1 201 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 CPSF4O95639 269 aaKnown RBP2.68□□□□□ -1.98
PDE8A-209ENST00000558543 NPYP01303 97 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 IGKV1-5P01602 117 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 PRB2P02812 416 aaPredicted RBP2.68□□□□□ -1.98
PDE8A-209ENST00000558543 CCKP06307 115 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 RNASE2P10153 161 aaKnown RBP2.68□□□□□ -1.98
PDE8A-209ENST00000558543 LINC01554Q52M75 96 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 NCBP2-AS2Q69YL0 99 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 Q8N2B8 174 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 RMI2Q96E14 147 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 CXCL16Q9H2A7 254 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 IL36BQ9NZH7 164 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 ZNF492Q9P255 531 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 TP73-AS1Q9UF72 201 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 PIK3C2AO00443 1686 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 TOPAZ1Q8N9V7 1692 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 KIDINS220Q9ULH0 1771 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 POLEQ07864 2286 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 NUP188Q5SRE5 1749 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 ALKQ9UM73 1620 aa2.68□□□□□ -1.98
PDE8A-209ENST00000558543 ANKRD12Q6UB98 2062 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 MCM3APO60318 1980 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 DOCK1Q14185 1865 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 PLCH1Q4KWH8 1693 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 ADGRB1O14514 1584 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 COL1A1P02452 1464 aaPredicted RBP2.67□□□□□ -1.98
PDE8A-209ENST00000558543 IGHV3OR15-7A0A075B7D8 119 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 TRAV3A0A0B4J244 114 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 MYMXA0A1B0GTQ4 84 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 BUB1B-PAK6H3BSN5 160 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 C19orf84I3L1E1 186 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 SLC25A20O43772 301 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 LEPROTL1O95214 131 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 IGHV1-46P01743 117 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 SAA1P0DJI8 122 aaPredicted RBP2.67□□□□□ -1.98
PDE8A-209ENST00000558543 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 CD28P10747 220 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 CAV3P56539 151 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 DSCR4P56555 118 aaPredicted RBP2.67□□□□□ -1.98
PDE8A-209ENST00000558543 RBM3P98179 157 aaKnown RBP2.67□□□□□ -1.98
PDE8A-209ENST00000558543 INSL4Q14641 139 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 SS18Q15532 418 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 GPHB5Q86YW7 130 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 Q8N8P6 123 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 TMEM105Q8N8V8 129 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 DYNLRB2Q8TF09 96 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 TXNDC17Q9BRA2 123 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 OSTCQ9NRP0 149 aa2.67□□□□□ -1.98
PDE8A-209ENST00000558543 NHP2Q9NX24 153 aaKnown RBP2.67□□□□□ -1.98
PDE8A-209ENST00000558543 ZNF706Q9Y5V0 76 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms