RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SPRY2O43597 315 aa12.2□□□□□ -0.46
SNX1-203ENST00000558040 SPINK4O60575 86 aa12.2□□□□□ -0.46
SNX1-203ENST00000558040 SPANXN1Q5VSR9 72 aa12.2□□□□□ -0.46
SNX1-203ENST00000558040 RNASE8Q8TDE3 154 aaKnown RBP12.2□□□□□ -0.46
SNX1-203ENST00000558040 CNFNQ9BYD5 112 aa12.2□□□□□ -0.46
SNX1-203ENST00000558040 SNURFLB1AK76 121 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 PRM2P04554 102 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 S100A8P05109 93 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 AZU1P20160 251 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 MRPL54Q6P161 138 aaKnown RBP12.19□□□□□ -0.46
SNX1-203ENST00000558040 RASL11AQ6T310 242 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 ZFP82Q8N141 532 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 C11orf72Q8NBR9 251 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 SYT8Q8NBV8 401 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 OR11H2Q8NH07 326 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 FAM210BQ96KR6 192 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 SPXQ9BT56 116 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 GSN-AS1Q9NRJ2 163 aa12.19□□□□□ -0.46
SNX1-203ENST00000558040 HBBP68871 147 aa12.18□□□□□ -0.46
SNX1-203ENST00000558040 COX19Q49B96 90 aa12.18□□□□□ -0.46
SNX1-203ENST00000558040 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
SNX1-203ENST00000558040 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
SNX1-203ENST00000558040 X6R8D5 127 aa12.18□□□□□ -0.46
SNX1-203ENST00000558040 IGHV4-4A0A075B6R2 117 aa12.17□□□□□ -0.46
SNX1-203ENST00000558040 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
SNX1-203ENST00000558040 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
SNX1-203ENST00000558040 M0R381 172 aa12.17□□□□□ -0.46
SNX1-203ENST00000558040 MIFP14174 115 aa12.17□□□□□ -0.46
SNX1-203ENST00000558040 TWIST1Q15672 202 aa12.17□□□□□ -0.46
SNX1-203ENST00000558040 MGAM2Q2M2H8 2515 aa12.17□□□□□ -0.46
SNX1-203ENST00000558040 A0A1B0GXF2 115 aa12.16□□□□□ -0.46
SNX1-203ENST00000558040 COLCA2A8K830 154 aa12.16□□□□□ -0.46
SNX1-203ENST00000558040 M0R2P5 195 aa12.16□□□□□ -0.46
SNX1-203ENST00000558040 NXPH4O95158 308 aa12.16□□□□□ -0.46
SNX1-203ENST00000558040 NTF3P20783 257 aa12.16□□□□□ -0.46
SNX1-203ENST00000558040 SSTP61278 116 aa12.16□□□□□ -0.46
SNX1-203ENST00000558040 PTH2Q96A98 100 aa12.16□□□□□ -0.46
SNX1-203ENST00000558040 TRGC1P0CF51 173 aa12.15□□□□□ -0.46
SNX1-203ENST00000558040 CAMPP49913 170 aa12.15□□□□□ -0.46
SNX1-203ENST00000558040 DAZ2Q13117 558 aaKnown RBP12.15□□□□□ -0.46
SNX1-203ENST00000558040 PIK3CD-AS1Q5SR53 167 aa12.15□□□□□ -0.46
SNX1-203ENST00000558040 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
SNX1-203ENST00000558040 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
SNX1-203ENST00000558040 OVOL2Q9BRP0 275 aa12.15□□□□□ -0.46
SNX1-203ENST00000558040 NDUFAF3Q9BU61 184 aa12.15□□□□□ -0.46
SNX1-203ENST00000558040 RAB4BP61018 213 aa12.14□□□□□ -0.47
SNX1-203ENST00000558040 ZNF876PQ49A33 203 aa12.14□□□□□ -0.47
SNX1-203ENST00000558040 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
SNX1-203ENST00000558040 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.14□□□□□ -0.47
SNX1-203ENST00000558040 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
SNX1-203ENST00000558040 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
SNX1-203ENST00000558040 MT-ND6P03923 174 aa12.13□□□□□ -0.47
SNX1-203ENST00000558040 RAB5AP20339 215 aa12.13□□□□□ -0.47
SNX1-203ENST00000558040 LGALS9BQ3B8N2 356 aa12.13□□□□□ -0.47
SNX1-203ENST00000558040 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
SNX1-203ENST00000558040 AP1S3Q96PC3 154 aa12.13□□□□□ -0.47
SNX1-203ENST00000558040 GNB1LQ9BYB4 327 aa12.13□□□□□ -0.47
SNX1-203ENST00000558040 DNAH3Q8TD57 4116 aa12.13□□□□□ -0.47
SNX1-203ENST00000558040 IGHV4-28A0A0C4DH34 117 aa12.12□□□□□ -0.47
SNX1-203ENST00000558040 HLA-DQA1P01909 254 aa12.12□□□□□ -0.47
SNX1-203ENST00000558040 Q8NAQ8 132 aa12.12□□□□□ -0.47
SNX1-203ENST00000558040 GATD1Q8NB37 220 aa12.12□□□□□ -0.47
SNX1-203ENST00000558040 RETNQ9HD89 108 aa12.12□□□□□ -0.47
SNX1-203ENST00000558040 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
SNX1-203ENST00000558040 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
SNX1-203ENST00000558040 TRGV1A0A0A0MS02 117 aa12.11□□□□□ -0.47
SNX1-203ENST00000558040 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
SNX1-203ENST00000558040 EMP1P54849 157 aa12.11□□□□□ -0.47
SNX1-203ENST00000558040 RASL10AQ92737 203 aa12.11□□□□□ -0.47
SNX1-203ENST00000558040 TM2D3Q9BRN9 247 aa12.11□□□□□ -0.47
SNX1-203ENST00000558040 TMEM191AQ9H0A3 160 aa12.11□□□□□ -0.47
SNX1-203ENST00000558040 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
SNX1-203ENST00000558040 A8MWV9 139 aa12.1□□□□□ -0.47
SNX1-203ENST00000558040 SMIM17P0DL12 118 aa12.1□□□□□ -0.47
SNX1-203ENST00000558040 TMEM136Q6ZRR5 245 aa12.1□□□□□ -0.47
SNX1-203ENST00000558040 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
SNX1-203ENST00000558040 NOTCH1P46531 2555 aa12.1□□□□□ -0.47
SNX1-203ENST00000558040 LYRM9A8MSI8 78 aa12.09□□□□□ -0.47
SNX1-203ENST00000558040 DEFA6Q01524 100 aa12.09□□□□□ -0.47
SNX1-203ENST00000558040 B9D2Q9BPU9 175 aa12.09□□□□□ -0.47
SNX1-203ENST00000558040 TRAPPC1Q9Y5R8 145 aa12.09□□□□□ -0.47
SNX1-203ENST00000558040 TEX48A0A1B0GUV7 120 aa12.08□□□□□ -0.48
SNX1-203ENST00000558040 EVI2AP22794 236 aa12.08□□□□□ -0.48
SNX1-203ENST00000558040 FRZBQ92765 325 aa12.08□□□□□ -0.48
SNX1-203ENST00000558040 DPH3P1Q9H4G8 78 aa12.08□□□□□ -0.48
SNX1-203ENST00000558040 MUC4Q99102 2169 aa12.08□□□□□ -0.48
SNX1-203ENST00000558040 APCSP02743 223 aa12.07□□□□□ -0.48
SNX1-203ENST00000558040 Q6ZTI0 123 aa12.07□□□□□ -0.48
SNX1-203ENST00000558040 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
SNX1-203ENST00000558040 MRPL18Q9H0U6 180 aaKnown RBP12.07□□□□□ -0.48
SNX1-203ENST00000558040 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
SNX1-203ENST00000558040 DNHD1Q96M86 4753 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 GAGE12BA1L429 117 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 RHODO00212 210 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 DEFB4AO15263 64 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 GAGE7O76087 117 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms