RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 HLA-DRB4X5D2U9 266 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 CRYBG3Q68DQ2 2970 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 APCP25054 2843 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 PLXNB1O43157 2135 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 LINC01549A6NIU2 74 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 H3BVH4 76 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 C3orf79P0CE67 100 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 EDN2P20800 178 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 TFPI2P48307 235 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 DEFB136Q30KP8 78 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 FAM19A2Q8N3H0 131 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 POM121L12Q8N7R1 296 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 PTH2Q96A98 100 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 RAX2Q96IS3 184 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 C20orf78Q9BR46 151 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 VAMP8Q9BV40 100 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 DPH3P1Q9H4G8 78 aa5.43□□□□□ -1.54
ATXN3-221ENST00000553498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.42□□□□□ -1.544e-12■■■□□ 18.3
ATXN3-221ENST00000553498 CENPEQ02224 2701 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 CHD6Q8TD26 2715 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 IGHV1OR15-1A0A075B7D0 117 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 KIR2DL5BA0A0G2JN68 375 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 KIR2DL5BA0A0G2JPC4 375 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 H3BMM0 161 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 TNFRSF6BO95407 300 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 LY6G6DO95868 133 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 HBDP02042 147 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 SMIM17P0DL12 118 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 PRB4P10163 310 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-221ENST00000553498 CD28P10747 220 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 G0S2P27469 103 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 DDTP30046 118 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 PROK1P58294 105 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 RPL32P62910 135 aaKnown RBP5.42□□□□□ -1.54
ATXN3-221ENST00000553498 AMTNQ6UX39 209 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 C18orf65Q6ZTR6 163 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 MRPL52Q86TS9 123 aaKnown RBP5.42□□□□□ -1.54
ATXN3-221ENST00000553498 NDUFA11Q86Y39 141 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 TMEM61Q8N0U2 210 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 KIR2DL5AQ8N109 375 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 ZNF664Q8N3J9 261 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 Q8N8P6 123 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 CITED2Q99967 270 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-221ENST00000553498 NDUFAF3Q9BU61 184 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 PTPN13Q12923 2485 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 CELSR1Q9NYQ6 3014 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 SPG11Q96JI7 2443 aa5.42□□□□□ -1.54
ATXN3-221ENST00000553498 TRAV12-3A0A0B4J271 114 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 SYS1-DBNDD2H3BUS1 97 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 NPYP01303 97 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 RNASE3P12724 160 aaKnown RBP5.41□□□□□ -1.54
ATXN3-221ENST00000553498 EVI2AP22794 236 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 IFI27P40305 119 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-221ENST00000553498 DEFB131AP59861 70 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 NUTF2P61970 127 aaKnown RBP5.41□□□□□ -1.54
ATXN3-221ENST00000553498 DEFA6Q01524 100 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 LBHQ53QV2 105 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-221ENST00000553498 Q8N976 141 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 C9orf85Q96MD7 179 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 MAP6D1Q9H9H5 199 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 MSRB1Q9NZV6 116 aa5.41□□□□□ -1.54
ATXN3-221ENST00000553498 ANKRD17O75179 2603 aaKnown RBP5.41□□□□□ -1.54
ATXN3-221ENST00000553498 IGHV3-16A0A0C4DH30 117 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 MUC21A0A0G2JKD1 596 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 MUC21A0A140T8X8 626 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 J3KRW8 73 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 TCAPO15273 167 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 CD7P09564 240 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 FCER1GP30273 86 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 CD300EQ496F6 205 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-221ENST00000553498 MUC21Q5SSG8 566 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 NRACQ8N912 160 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 ZNF747Q9BV97 191 aa5.4□□□□□ -1.54
ATXN3-221ENST00000553498 ZNF256Q9Y2P7 627 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-221ENST00000553498 CREBBPQ92793 2442 aa5.4□□□□□ -1.55
ATXN3-221ENST00000553498 PDZD2O15018 2839 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 TRAV9-2A0A087WT02 112 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 C9orf118A6NHY6 69 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 OR11H12B2RN74 326 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 HSBP1L1C9JCN9 74 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 GNRH2O43555 120 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 ATP5LO75964 103 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 INSP01308 110 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 DEFB1P60022 68 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 SSTP61278 116 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 SPINK13Q1W4C9 94 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 ORMDL2Q53FV1 153 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 LINC01545Q5VT33 79 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 MIEN1Q9BRT3 115 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 SPXQ9BT56 116 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 EDA2RQ9HAV5 297 aa5.39□□□□□ -1.55
ATXN3-221ENST00000553498 CR1P17927 2039 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 UNC79Q9P2D8 2635 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 MED13LQ71F56 2210 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 IGLV2-18A0A075B6J9 118 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms