RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	C7orf71	A4D174	169 aa		10.71	□□□□□ -0.69
PDE1B-206	ENST00000550285	RBMY1A1	P0DJD3	496 aa	Known RBP	10.71	□□□□□ -0.69
PDE1B-206	ENST00000550285	RBMY1C	P0DJD4	496 aa		10.71	□□□□□ -0.69
PDE1B-206	ENST00000550285	RPS20	P60866	119 aa	Known RBP	10.71	□□□□□ -0.69
PDE1B-206	ENST00000550285	RBMY1F	Q15415	496 aa	Known RBP	10.71	□□□□□ -0.69
PDE1B-206	ENST00000550285	WDR73	Q6P4I2	378 aa		10.71	□□□□□ -0.69
PDE1B-206	ENST00000550285		A0A1B0GUT8	65 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285		A8MTW9	85 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	CRX	O43186	299 aa	Predicted RBP	10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	HBB	P68871	147 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	SLA	Q13239	276 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	ZNF747	Q9BV97	191 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	C19orf73	Q9NVV2	129 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	MSRB1	Q9NZV6	116 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	CMYA5	Q8N3K9	4069 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	TP53TG3	Q9ULZ0	132 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	COL6A5	A8TX70	2615 aa		10.7	□□□□□ -0.7
PDE1B-206	ENST00000550285	ATP5L2	Q7Z4Y8	100 aa		10.69	□□□□□ -0.7
PDE1B-206	ENST00000550285	TMEM256	Q8N2U0	113 aa		10.69	□□□□□ -0.7
PDE1B-206	ENST00000550285	C3orf56	Q8N813	242 aa		10.69	□□□□□ -0.7
PDE1B-206	ENST00000550285	OR2K2	Q8NGT1	345 aa		10.69	□□□□□ -0.7
PDE1B-206	ENST00000550285	PRM2	P04554	102 aa		10.69	□□□□□ -0.7
PDE1B-206	ENST00000550285	ESD	P10768	282 aa		10.69	□□□□□ -0.7
PDE1B-206	ENST00000550285	IGLL1	P15814	213 aa		10.69	□□□□□ -0.7
PDE1B-206	ENST00000550285	CTRL	P40313	264 aa		10.69	□□□□□ -0.7
PDE1B-206	ENST00000550285		H3BVH4	76 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285	NTF3	P20783	257 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285	TSPO	P30536	169 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285		Q0VG73	95 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285	RASL11A	Q6T310	242 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285	OR10AG1	Q8NH19	301 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285	PKD1L1	Q8TDX9	2849 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285	C9orf66	Q5T8R8	295 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285	STH	Q8IWL8	128 aa		10.68	□□□□□ -0.7
PDE1B-206	ENST00000550285	NUPR1	O60356	82 aa		10.67	□□□□□ -0.7
PDE1B-206	ENST00000550285	HLA-DQA1	P01909	254 aa		10.67	□□□□□ -0.7
PDE1B-206	ENST00000550285	RIG	Q13278	110 aa		10.67	□□□□□ -0.7
PDE1B-206	ENST00000550285	TRPT1	Q86TN4	253 aa	Known RBP	10.67	□□□□□ -0.7
PDE1B-206	ENST00000550285		K7EP13	123 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	APCS	P02743	223 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	TWIST1	Q15672	202 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	FAM159A	Q6UWV7	190 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	C12orf54	Q6X4T0	127 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	WFDC9	Q8NEX5	89 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	TMEM238L	A0A1B0GVL6	79 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	RNASE3	P12724	160 aa	Known RBP	10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	LINC00310	P59036	64 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	C20orf144	Q9BQM9	153 aa		10.66	□□□□□ -0.7
PDE1B-206	ENST00000550285	DEFB125	Q8N687	156 aa		10.65	□□□□□ -0.7
PDE1B-206	ENST00000550285	BORCS7	Q96B45	105 aa		10.65	□□□□□ -0.7
PDE1B-206	ENST00000550285	XCL2	Q9UBD3	114 aa		10.65	□□□□□ -0.7
PDE1B-206	ENST00000550285	MUC4	Q99102	2169 aa		10.65	□□□□□ -0.7
PDE1B-206	ENST00000550285	HTN1	P15515	57 aa		10.65	□□□□□ -0.71
PDE1B-206	ENST00000550285	RPL35A	P18077	110 aa	Known RBP	10.65	□□□□□ -0.71
PDE1B-206	ENST00000550285	ASIP	P42127	132 aa		10.65	□□□□□ -0.71
PDE1B-206	ENST00000550285	INSL3	P51460	131 aa		10.65	□□□□□ -0.71
PDE1B-206	ENST00000550285	CNFN	Q9BYD5	112 aa		10.65	□□□□□ -0.71
PDE1B-206	ENST00000550285	MDFIC	Q9P1T7	246 aa		10.65	□□□□□ -0.71
PDE1B-206	ENST00000550285		F2Z2F3	143 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	SNAI2	O43623	268 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	S100A4	P26447	101 aa	Known RBP	10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	OR10J3	Q5JRS4	329 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	COL5A1-AS1	Q5SY13	56 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285		Q8N1Y9	231 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	MIEN1	Q9BRT3	115 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	IGHV1OR15-1	A0A075B7D0	117 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	SERF1A	O75920	110 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	OR5AL1	P0C617	328 aa		10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	RNASE8	Q8TDE3	154 aa	Known RBP	10.64	□□□□□ -0.71
PDE1B-206	ENST00000550285	SRI	P30626	198 aa		10.63	□□□□□ -0.71
PDE1B-206	ENST00000550285	TDRG1	Q3Y452	100 aa		10.63	□□□□□ -0.71
PDE1B-206	ENST00000550285	SHISA2	Q6UWI4	295 aa		10.63	□□□□□ -0.71
PDE1B-206	ENST00000550285	AMN1	Q8IY45	258 aa		10.63	□□□□□ -0.71
PDE1B-206	ENST00000550285	TMEM158	Q8WZ71	300 aa		10.63	□□□□□ -0.71
PDE1B-206	ENST00000550285	FAM110A	Q9BQ89	295 aa		10.63	□□□□□ -0.71
PDE1B-206	ENST00000550285	CIDEA	O60543	219 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	GIG44	P09565	113 aa	Predicted RBP	10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	CMC4	P56277	68 aa	Predicted RBP	10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	BAGE3	Q86Y29	109 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	GATD1	Q8NB37	220 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	CLUHP3	Q96NS8	147 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	IGHV3-16	A0A0C4DH30	117 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285		M0R381	172 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	SPANXN1	Q5VSR9	72 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	ZNF493	Q6ZR52	646 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	KCNS1	Q96KK3	526 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	SCRT2	Q9NQ03	307 aa		10.62	□□□□□ -0.71
PDE1B-206	ENST00000550285	C20orf202	A1L168	122 aa		10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285	PPBP	P02775	128 aa		10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285	EVI2A	P22794	236 aa		10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285	OXLD1	Q5BKU9	147 aa		10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285		A0A1B0GW15	77 aa		10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285	SMIM15	Q7Z3B0	74 aa		10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285	C1orf158	Q8N1D5	194 aa		10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285	ORAOV1	Q8WV07	137 aa		10.61	□□□□□ -0.71
PDE1B-206	ENST00000550285	IGHV3OR16-12	A0A075B7B8	117 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms