RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PHLDA3Q9Y5J5 127 aa12.6□□□□□ -0.39
LETMD1-220ENST00000549686 IGHV4-4A0A075B6R2 117 aa12.59□□□□□ -0.39
LETMD1-220ENST00000549686 DEFB135Q30KP9 77 aa12.59□□□□□ -0.39
LETMD1-220ENST00000549686 COX19Q49B96 90 aa12.59□□□□□ -0.39
LETMD1-220ENST00000549686 RNASE8Q8TDE3 154 aaKnown RBP12.59□□□□□ -0.39
LETMD1-220ENST00000549686 PTH2Q96A98 100 aa12.59□□□□□ -0.39
LETMD1-220ENST00000549686 SPRY2O43597 315 aa12.58□□□□□ -0.4
LETMD1-220ENST00000549686 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
LETMD1-220ENST00000549686 ZFP82Q8N141 532 aa12.58□□□□□ -0.4
LETMD1-220ENST00000549686 C11orf72Q8NBR9 251 aa12.58□□□□□ -0.4
LETMD1-220ENST00000549686 SYT8Q8NBV8 401 aa12.58□□□□□ -0.4
LETMD1-220ENST00000549686 MDFICQ9P1T7 246 aa12.58□□□□□ -0.4
LETMD1-220ENST00000549686 MIFP14174 115 aa12.57□□□□□ -0.4
LETMD1-220ENST00000549686 DEFB121Q5J5C9 76 aa12.57□□□□□ -0.4
LETMD1-220ENST00000549686 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
LETMD1-220ENST00000549686 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
LETMD1-220ENST00000549686 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
LETMD1-220ENST00000549686 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
LETMD1-220ENST00000549686 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
LETMD1-220ENST00000549686 X6R8D5 127 aa12.57□□□□□ -0.4
LETMD1-220ENST00000549686 NOTCH1P46531 2555 aa12.57□□□□□ -0.4
LETMD1-220ENST00000549686 TGIF2-C20orf24A0A0A6YYL0 155 aa12.56□□□□□ -0.4
LETMD1-220ENST00000549686 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
LETMD1-220ENST00000549686 NXPH4O95158 308 aa12.56□□□□□ -0.4
LETMD1-220ENST00000549686 AZU1P20160 251 aa12.56□□□□□ -0.4
LETMD1-220ENST00000549686 HBBP68871 147 aa12.56□□□□□ -0.4
LETMD1-220ENST00000549686 OR11H2Q8NH07 326 aa12.56□□□□□ -0.4
LETMD1-220ENST00000549686 OR10AG1Q8NH19 301 aa12.56□□□□□ -0.4
LETMD1-220ENST00000549686 A0A1B0GXF2 115 aa12.55□□□□□ -0.4
LETMD1-220ENST00000549686 COLCA2A8K830 154 aa12.55□□□□□ -0.4
LETMD1-220ENST00000549686 M0R2P5 195 aa12.55□□□□□ -0.4
LETMD1-220ENST00000549686 DAZ2Q13117 558 aaKnown RBP12.55□□□□□ -0.4
LETMD1-220ENST00000549686 TWIST1Q15672 202 aa12.55□□□□□ -0.4
LETMD1-220ENST00000549686 MRPL54Q6P161 138 aaKnown RBP12.55□□□□□ -0.4
LETMD1-220ENST00000549686 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
LETMD1-220ENST00000549686 GSN-AS1Q9NRJ2 163 aa12.55□□□□□ -0.4
LETMD1-220ENST00000549686 NBEAL1Q6ZS30 2694 aa12.54□□□□□ -0.4
LETMD1-220ENST00000549686 SPINK4O60575 86 aa12.54□□□□□ -0.4
LETMD1-220ENST00000549686 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
LETMD1-220ENST00000549686 NTF3P20783 257 aa12.54□□□□□ -0.4
LETMD1-220ENST00000549686 SMIM15Q7Z3B0 74 aa12.54□□□□□ -0.4
LETMD1-220ENST00000549686 MT-ND6P03923 174 aa12.53□□□□□ -0.4
LETMD1-220ENST00000549686 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
LETMD1-220ENST00000549686 GATD1Q8NB37 220 aa12.53□□□□□ -0.4
LETMD1-220ENST00000549686 MRAPQ8TCY5 172 aa12.53□□□□□ -0.4
LETMD1-220ENST00000549686 SPATA25Q9BR10 227 aa12.53□□□□□ -0.4
LETMD1-220ENST00000549686 OVOL2Q9BRP0 275 aa12.53□□□□□ -0.4
LETMD1-220ENST00000549686 GNB1LQ9BYB4 327 aa12.53□□□□□ -0.4
LETMD1-220ENST00000549686 M0R381 172 aa12.52□□□□□ -0.41
LETMD1-220ENST00000549686 PRM2P04554 102 aa12.52□□□□□ -0.41
LETMD1-220ENST00000549686 RAB5AP20339 215 aa12.52□□□□□ -0.41
LETMD1-220ENST00000549686 CAMPP49913 170 aa12.52□□□□□ -0.41
LETMD1-220ENST00000549686 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
LETMD1-220ENST00000549686 AP1S3Q96PC3 154 aa12.52□□□□□ -0.41
LETMD1-220ENST00000549686 MUC21A0A0G2JKD1 596 aa12.51□□□□□ -0.41
LETMD1-220ENST00000549686 MUC21A0A140T8X8 626 aa12.51□□□□□ -0.41
LETMD1-220ENST00000549686 PLAC8L1A1L4L8 177 aa12.51□□□□□ -0.41
LETMD1-220ENST00000549686 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
LETMD1-220ENST00000549686 SBSPONQ8IVN8 264 aa12.51□□□□□ -0.41
LETMD1-220ENST00000549686 RASL10AQ92737 203 aa12.51□□□□□ -0.41
LETMD1-220ENST00000549686 TM2D3Q9BRN9 247 aa12.51□□□□□ -0.41
LETMD1-220ENST00000549686 HLA-DQA1P01909 254 aa12.5□□□□□ -0.41
LETMD1-220ENST00000549686 Q8NAQ8 132 aa12.5□□□□□ -0.41
LETMD1-220ENST00000549686 TMEM191AQ9H0A3 160 aa12.5□□□□□ -0.41
LETMD1-220ENST00000549686 IGHV4-28A0A0C4DH34 117 aa12.49□□□□□ -0.41
LETMD1-220ENST00000549686 TEX48A0A1B0GUV7 120 aa12.49□□□□□ -0.41
LETMD1-220ENST00000549686 LYRM9A8MSI8 78 aa12.49□□□□□ -0.41
LETMD1-220ENST00000549686 A8MWV9 139 aa12.49□□□□□ -0.41
LETMD1-220ENST00000549686 RAB4BP61018 213 aa12.49□□□□□ -0.41
LETMD1-220ENST00000549686 SSTP61278 116 aa12.49□□□□□ -0.41
LETMD1-220ENST00000549686 TMEM136Q6ZRR5 245 aa12.49□□□□□ -0.41
LETMD1-220ENST00000549686 NOP10Q9NPE3 64 aaKnown RBP12.49□□□□□ -0.41
LETMD1-220ENST00000549686 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
LETMD1-220ENST00000549686 RPS10P46783 165 aaKnown RBP12.48□□□□□ -0.41
LETMD1-220ENST00000549686 B9D2Q9BPU9 175 aa12.48□□□□□ -0.41
LETMD1-220ENST00000549686 ZMAT4Q9H898 229 aa12.48□□□□□ -0.41
LETMD1-220ENST00000549686 MSRB1Q9NZV6 116 aa12.48□□□□□ -0.41
LETMD1-220ENST00000549686 TRGV1A0A0A0MS02 117 aa12.47□□□□□ -0.41
LETMD1-220ENST00000549686 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-220ENST00000549686 C11orf68Q9H3H3 251 aaKnown RBP12.47□□□□□ -0.41
LETMD1-220ENST00000549686 DPH3P1Q9H4G8 78 aa12.47□□□□□ -0.41
LETMD1-220ENST00000549686 CIDEAO60543 219 aa12.46□□□□□ -0.41
LETMD1-220ENST00000549686 EMP1P54849 157 aa12.46□□□□□ -0.41
LETMD1-220ENST00000549686 C18orf15Q96N68 181 aa12.46□□□□□ -0.41
LETMD1-220ENST00000549686 MRPL16Q9NX20 251 aaKnown RBP12.46□□□□□ -0.41
LETMD1-220ENST00000549686 TRAPPC1Q9Y5R8 145 aa12.46□□□□□ -0.41
LETMD1-220ENST00000549686 RHODO00212 210 aa12.45□□□□□ -0.42
LETMD1-220ENST00000549686 EVI2AP22794 236 aa12.45□□□□□ -0.42
LETMD1-220ENST00000549686 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
LETMD1-220ENST00000549686 LINC00612Q8N6U2 182 aa12.45□□□□□ -0.42
LETMD1-220ENST00000549686 FRZBQ92765 325 aa12.45□□□□□ -0.42
LETMD1-220ENST00000549686 RETNQ9HD89 108 aa12.45□□□□□ -0.42
LETMD1-220ENST00000549686 RS1O15537 224 aa12.44□□□□□ -0.42
LETMD1-220ENST00000549686 APCSP02743 223 aa12.44□□□□□ -0.42
LETMD1-220ENST00000549686 SPART-AS1P0CW21 52 aa12.44□□□□□ -0.42
LETMD1-220ENST00000549686 DEFA6Q01524 100 aa12.44□□□□□ -0.42
LETMD1-220ENST00000549686 Q6ZTI0 123 aa12.44□□□□□ -0.42
LETMD1-220ENST00000549686 C14orf178Q8N769 122 aaPredicted RBP12.44□□□□□ -0.42
LETMD1-220ENST00000549686 MRPL18Q9H0U6 180 aaKnown RBP12.44□□□□□ -0.42
LETMD1-220ENST00000549686 TRAV4A0A0B4J268 109 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms