RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 OVOL2Q9BRP0 275 aa20.75■□□□□ 0.91
BRF1-213ENST00000548421 SCRT2Q9NQ03 307 aa20.75■□□□□ 0.91
BRF1-213ENST00000548421 GSN-AS1Q9NRJ2 163 aa20.75■□□□□ 0.91
BRF1-213ENST00000548421 TRAV9-1A0A075B6T8 112 aa20.74■□□□□ 0.91
BRF1-213ENST00000548421 BORCS7Q96B45 105 aa20.74■□□□□ 0.91
BRF1-213ENST00000548421 PHLDA3Q9Y5J5 127 aa20.74■□□□□ 0.91
BRF1-213ENST00000548421 ELOBQ15370 118 aa20.73■□□□□ 0.91
BRF1-213ENST00000548421 BTF3L4Q96K17 158 aa20.73■□□□□ 0.91
BRF1-213ENST00000548421 RETNQ9HD89 108 aa20.73■□□□□ 0.91
BRF1-213ENST00000548421 MUC4Q99102 2169 aa20.72■□□□□ 0.91
BRF1-213ENST00000548421 MIFP14174 115 aa20.72■□□□□ 0.91
BRF1-213ENST00000548421 OR10AG1Q8NH19 301 aa20.72■□□□□ 0.91
BRF1-213ENST00000548421 CNFNQ9BYD5 112 aa20.72■□□□□ 0.91
BRF1-213ENST00000548421 A0A1B0GUT8 65 aa20.71■□□□□ 0.91
BRF1-213ENST00000548421 SNURFLB1AK76 121 aa20.71■□□□□ 0.91
BRF1-213ENST00000548421 DEFA6Q01524 100 aa20.71■□□□□ 0.91
BRF1-213ENST00000548421 IL17DQ8TAD2 202 aa20.71■□□□□ 0.91
BRF1-213ENST00000548421 MEGF8Q7Z7M0 2845 aa20.7■□□□□ 0.9
BRF1-213ENST00000548421 MUC21A0A0G2JKD1 596 aa20.7■□□□□ 0.9
BRF1-213ENST00000548421 MUC21A0A140T8X8 626 aa20.7■□□□□ 0.9
BRF1-213ENST00000548421 SPINK4O60575 86 aa20.7■□□□□ 0.9
BRF1-213ENST00000548421 YPEL4Q96NS1 127 aa20.7■□□□□ 0.9
BRF1-213ENST00000548421 SPATA25Q9BR10 227 aa20.7■□□□□ 0.9
BRF1-213ENST00000548421 TM2D3Q9BRN9 247 aa20.7■□□□□ 0.9
BRF1-213ENST00000548421 SPXQ9BT56 116 aa20.7■□□□□ 0.9
BRF1-213ENST00000548421 PLAC8L1A1L4L8 177 aa20.69■□□□□ 0.9
BRF1-213ENST00000548421 CACNG7P62955 275 aa20.69■□□□□ 0.9
BRF1-213ENST00000548421 SPANXN1Q5VSR9 72 aa20.69■□□□□ 0.9
BRF1-213ENST00000548421 WDR73Q6P4I2 378 aa20.69■□□□□ 0.9
BRF1-213ENST00000548421 SSTP61278 116 aa20.68■□□□□ 0.9
BRF1-213ENST00000548421 ATP5L2Q7Z4Y8 100 aa20.68■□□□□ 0.9
BRF1-213ENST00000548421 ZFP82Q8N141 532 aa20.68■□□□□ 0.9
BRF1-213ENST00000548421 Q8NAQ8 132 aa20.68■□□□□ 0.9
BRF1-213ENST00000548421 IGHV4-4A0A075B6R2 117 aa20.67■□□□□ 0.9
BRF1-213ENST00000548421 IGHV4-28A0A0C4DH34 117 aa20.67■□□□□ 0.9
BRF1-213ENST00000548421 M0R2P5 195 aa20.67■□□□□ 0.9
BRF1-213ENST00000548421 M0R381 172 aa20.67■□□□□ 0.9
BRF1-213ENST00000548421 DAZ2Q13117 558 aaKnown RBP20.67■□□□□ 0.9
BRF1-213ENST00000548421 RIGQ13278 110 aa20.67■□□□□ 0.9
BRF1-213ENST00000548421 MRPL54Q6P161 138 aaKnown RBP20.67■□□□□ 0.9
BRF1-213ENST00000548421 TRBV24-1A0A075B6N3 115 aa20.66■□□□□ 0.9
BRF1-213ENST00000548421 TGIF2-C20orf24A0A0A6YYL0 155 aa20.66■□□□□ 0.9
BRF1-213ENST00000548421 NXPH4O95158 308 aa20.66■□□□□ 0.9
BRF1-213ENST00000548421 NTF3P20783 257 aa20.66■□□□□ 0.9
BRF1-213ENST00000548421 SYT8Q8NBV8 401 aa20.66■□□□□ 0.9
BRF1-213ENST00000548421 B9D2Q9BPU9 175 aa20.66■□□□□ 0.9
BRF1-213ENST00000548421 TWIST1Q15672 202 aa20.65■□□□□ 0.9
BRF1-213ENST00000548421 EMP1P54849 157 aa20.64■□□□□ 0.89
BRF1-213ENST00000548421 DMRTA1Q5VZB9 504 aa20.64■□□□□ 0.89
BRF1-213ENST00000548421 PTH2Q96A98 100 aa20.64■□□□□ 0.89
BRF1-213ENST00000548421 NOP10Q9NPE3 64 aaKnown RBP20.64■□□□□ 0.89
BRF1-213ENST00000548421 A0A1B0GW15 77 aa20.63■□□□□ 0.89
BRF1-213ENST00000548421 A0A1B0GXF2 115 aa20.63■□□□□ 0.89
BRF1-213ENST00000548421 HBBP68871 147 aa20.63■□□□□ 0.89
BRF1-213ENST00000548421 ZNF876PQ49A33 203 aa20.63■□□□□ 0.89
BRF1-213ENST00000548421 ZMAT4Q9H898 229 aa20.62■□□□□ 0.89
BRF1-213ENST00000548421 MSRB1Q9NZV6 116 aa20.62■□□□□ 0.89
BRF1-213ENST00000548421 LGALS9BQ3B8N2 356 aa20.62■□□□□ 0.89
BRF1-213ENST00000548421 PIK3CD-AS1Q5SR53 167 aa20.62■□□□□ 0.89
BRF1-213ENST00000548421 FAM210BQ96KR6 192 aa20.62■□□□□ 0.89
BRF1-213ENST00000548421 CAMPP49913 170 aa20.61■□□□□ 0.89
BRF1-213ENST00000548421 RASL11AQ6T310 242 aa20.61■□□□□ 0.89
BRF1-213ENST00000548421 MRPL16Q9NX20 251 aaKnown RBP20.61■□□□□ 0.89
BRF1-213ENST00000548421 DNAH9Q9NYC9 4486 aa20.6■□□□□ 0.89
BRF1-213ENST00000548421 TENM3Q9P273 2699 aa20.6■□□□□ 0.89
BRF1-213ENST00000548421 TRGV1A0A0A0MS02 117 aa20.6■□□□□ 0.89
BRF1-213ENST00000548421 DEFB4AO15263 64 aa20.6■□□□□ 0.89
BRF1-213ENST00000548421 S100A8P05109 93 aa20.6■□□□□ 0.89
BRF1-213ENST00000548421 RASL10AQ92737 203 aa20.6■□□□□ 0.89
BRF1-213ENST00000548421 NDUFAF3Q9BU61 184 aa20.6■□□□□ 0.89
BRF1-213ENST00000548421 HUWE1Q7Z6Z7 4374 aaKnown RBP20.59■□□□□ 0.89
BRF1-213ENST00000548421 COLCA2A8K830 154 aa20.59■□□□□ 0.89
BRF1-213ENST00000548421 TRGC1P0CF51 173 aa20.58■□□□□ 0.89
BRF1-213ENST00000548421 AP1S3Q96PC3 154 aa20.58■□□□□ 0.89
BRF1-213ENST00000548421 PRKDCP78527 4128 aaKnown RBP20.58■□□□□ 0.88
BRF1-213ENST00000548421 Q6ZTI0 123 aa20.57■□□□□ 0.88
BRF1-213ENST00000548421 LYRM9A8MSI8 78 aa20.56■□□□□ 0.88
BRF1-213ENST00000548421 C11orf68Q9H3H3 251 aaKnown RBP20.56■□□□□ 0.88
BRF1-213ENST00000548421 COX19Q49B96 90 aa20.56■□□□□ 0.88
BRF1-213ENST00000548421 SMIM15Q7Z3B0 74 aa20.56■□□□□ 0.88
BRF1-213ENST00000548421 FAM222AQ5U5X8 452 aa20.55■□□□□ 0.88
BRF1-213ENST00000548421 GATD1Q8NB37 220 aa20.55■□□□□ 0.88
BRF1-213ENST00000548421 DKK2Q9UBU2 259 aa20.55■□□□□ 0.88
BRF1-213ENST00000548421 RAB4BP61018 213 aa20.54■□□□□ 0.88
BRF1-213ENST00000548421 TMEM191AQ9H0A3 160 aa20.54■□□□□ 0.88
BRF1-213ENST00000548421 JPT2Q9H910 190 aa20.54■□□□□ 0.88
BRF1-213ENST00000548421 GAGE12BA1L429 117 aa20.53■□□□□ 0.88
BRF1-213ENST00000548421 A8MWV9 139 aa20.53■□□□□ 0.88
BRF1-213ENST00000548421 GAGE7O76087 117 aa20.53■□□□□ 0.88
BRF1-213ENST00000548421 GAGE12FP0CL80 117 aa20.53■□□□□ 0.88
BRF1-213ENST00000548421 GAGE12GP0CL81 117 aa20.53■□□□□ 0.88
BRF1-213ENST00000548421 GAGE12IP0CL82 117 aa20.53■□□□□ 0.88
BRF1-213ENST00000548421 EVI2AP22794 236 aa20.53■□□□□ 0.88
BRF1-213ENST00000548421 GNB1LQ9BYB4 327 aa20.53■□□□□ 0.88
BRF1-213ENST00000548421 TMEM136Q6ZRR5 245 aa20.52■□□□□ 0.88
BRF1-213ENST00000548421 LINC00612Q8N6U2 182 aa20.52■□□□□ 0.88
BRF1-213ENST00000548421 NHLRC4P0CG21 123 aaPredicted RBP20.51■□□□□ 0.87
BRF1-213ENST00000548421 SPART-AS1P0CW21 52 aa20.51■□□□□ 0.87
BRF1-213ENST00000548421 SMIM17P0DL12 118 aa20.51■□□□□ 0.87
BRF1-213ENST00000548421 RAB5AP20339 215 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms