RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 C11orf72Q8NBR9 251 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 SYT8Q8NBV8 401 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 PGLYRP4Q96LB8 373 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 B9D2Q9BPU9 175 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 TM2D3Q9BRN9 247 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 ZMAT4Q9H898 229 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 SCRT2Q9NQ03 307 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 GSN-AS1Q9NRJ2 163 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 TIMM8BQ9Y5J9 83 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 A0A1B0GW15 77 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 FAM3BP58499 235 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 DAZ2Q13117 558 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 RIGQ13278 110 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 PIK3CD-AS1Q5SR53 167 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 ZFP82Q8N141 532 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 PTH2Q96A98 100 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 NDUFAF3Q9BU61 184 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 CNFNQ9BYD5 112 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 URGCP-MRPS24S4R325 110 aa11.42□□□□□ -0.58
TRAFD1-203ENST00000547063 M0R2P5 195 aa11.41□□□□□ -0.58
TRAFD1-203ENST00000547063 S100A8P05109 93 aa11.41□□□□□ -0.58
TRAFD1-203ENST00000547063 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
TRAFD1-203ENST00000547063 IGHV4-4A0A075B6R2 117 aa11.4□□□□□ -0.58
TRAFD1-203ENST00000547063 PRM2P04554 102 aa11.4□□□□□ -0.58
TRAFD1-203ENST00000547063 LGALS9BQ3B8N2 356 aa11.4□□□□□ -0.58
TRAFD1-203ENST00000547063 TMEM88Q6PEY1 159 aa11.4□□□□□ -0.58
TRAFD1-203ENST00000547063 CBLN2Q8IUK8 224 aa11.4□□□□□ -0.58
TRAFD1-203ENST00000547063 IL17DQ8TAD2 202 aa11.4□□□□□ -0.58
TRAFD1-203ENST00000547063 IGHV4-28A0A0C4DH34 117 aa11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 TEX48A0A1B0GUV7 120 aa11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 NXPH4O95158 308 aa11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 NHLRC4P0CG21 123 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 ELOBQ15370 118 aa11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 COX19Q49B96 90 aa11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 Q8NAQ8 132 aa11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
TRAFD1-203ENST00000547063 TRBV24-1A0A075B6N3 115 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 LYRM9A8MSI8 78 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 M0R381 172 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 TRGC1P0CF51 173 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 NTF3P20783 257 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 HBBP68871 147 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 TWIST1Q15672 202 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 ZNF876PQ49A33 203 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 SMIM15Q7Z3B0 74 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 C11orf68Q9H3H3 251 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 RETNQ9HD89 108 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 CMYA5Q8N3K9 4069 aa11.38□□□□□ -0.59
TRAFD1-203ENST00000547063 SPINK4O60575 86 aa11.37□□□□□ -0.59
TRAFD1-203ENST00000547063 SCO1O75880 301 aa11.37□□□□□ -0.59
TRAFD1-203ENST00000547063 RASL10AQ92737 203 aa11.37□□□□□ -0.59
TRAFD1-203ENST00000547063 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-203ENST00000547063 TRGV1A0A0A0MS02 117 aa11.36□□□□□ -0.59
TRAFD1-203ENST00000547063 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
TRAFD1-203ENST00000547063 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
TRAFD1-203ENST00000547063 EMP1P54849 157 aa11.36□□□□□ -0.59
TRAFD1-203ENST00000547063 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
TRAFD1-203ENST00000547063 MRPL54Q6P161 138 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-203ENST00000547063 AP1S3Q96PC3 154 aa11.36□□□□□ -0.59
TRAFD1-203ENST00000547063 A0A1B0GXF2 115 aa11.35□□□□□ -0.59
TRAFD1-203ENST00000547063 A8MWV9 139 aa11.35□□□□□ -0.59
TRAFD1-203ENST00000547063 SPART-AS1P0CW21 52 aa11.35□□□□□ -0.59
TRAFD1-203ENST00000547063 SSTP61278 116 aa11.35□□□□□ -0.59
TRAFD1-203ENST00000547063 FAM210BQ96KR6 192 aa11.35□□□□□ -0.59
TRAFD1-203ENST00000547063 YPEL4Q96NS1 127 aa11.35□□□□□ -0.59
TRAFD1-203ENST00000547063 MUC4Q99102 2169 aa11.35□□□□□ -0.59
TRAFD1-203ENST00000547063 TGIF2-C20orf24A0A0A6YYL0 155 aa11.34□□□□□ -0.59
TRAFD1-203ENST00000547063 SMIM17P0DL12 118 aa11.34□□□□□ -0.59
TRAFD1-203ENST00000547063 CAMPP49913 170 aa11.34□□□□□ -0.59
TRAFD1-203ENST00000547063 MRPL16Q9NX20 251 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-203ENST00000547063 CIDEAO60543 219 aa11.33□□□□□ -0.6
TRAFD1-203ENST00000547063 MT-ND6P03923 174 aa11.33□□□□□ -0.6
TRAFD1-203ENST00000547063 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
TRAFD1-203ENST00000547063 Q6ZTI0 123 aa11.33□□□□□ -0.6
TRAFD1-203ENST00000547063 TMEM191AQ9H0A3 160 aa11.33□□□□□ -0.6
TRAFD1-203ENST00000547063 DKK2Q9UBU2 259 aa11.33□□□□□ -0.6
TRAFD1-203ENST00000547063 DNHD1Q96M86 4753 aa11.33□□□□□ -0.6
TRAFD1-203ENST00000547063 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 RHODO00212 210 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 HLA-DQA1P01909 254 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 RAB4BP61018 213 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 C18orf15Q96N68 181 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 GNB1LQ9BYB4 327 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 MSRB1Q9NZV6 116 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 NBEAL2Q6ZNJ1 2754 aa11.32□□□□□ -0.6
TRAFD1-203ENST00000547063 GAGE12BA1L429 117 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 DEFB4AO15263 64 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 GAGE7O76087 117 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 DAD1P61803 113 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 DPH3P1Q9H4G8 78 aa11.31□□□□□ -0.6
TRAFD1-203ENST00000547063 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms