RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 FAM25AB3EWG3 89 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 FAM25CB3EWG5 89 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 FAM25GB3EWG6 89 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 SYNGR2O43760 224 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 CIDEAO60543 219 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 ZNF253O75346 499 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 MED6O75586 246 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 CRPP02741 224 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 IGLC2P0DOY2 106 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 HIST1H1EP10412 219 aaKnown RBP2.97□□□□□ -1.93
LIMS1-214ENST00000542845 CRISP2P16562 243 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 AQP4P55087 323 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 PLP1P60201 277 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 LSM3P62310 102 aaKnown RBP2.97□□□□□ -1.93
LIMS1-214ENST00000542845 RPL19P84098 196 aaKnown RBP2.97□□□□□ -1.93
LIMS1-214ENST00000542845 Q0VG73 95 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 ELOBQ15370 118 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 SURF2Q15527 256 aaPredicted RBP2.97□□□□□ -1.93
LIMS1-214ENST00000542845 MAJINQ3KP22 176 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 ZNF876PQ49A33 203 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 OR51S1Q8NGJ8 323 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 OR2T35Q8NGX2 323 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 Q8TAT8 98 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 MRPL53Q96EL3 112 aaKnown RBP2.97□□□□□ -1.93
LIMS1-214ENST00000542845 CNBD2Q96M20 576 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 C20orf85Q9H1P6 137 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 NPVFQ9HCQ7 196 aa2.97□□□□□ -1.93
LIMS1-214ENST00000542845 A0A087WWC5 75 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 IGLV9-49A0A0B4J1Y8 123 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 A0A0B4J2A0 478 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 IGKV2-24A0A0C4DH68 120 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 MUC21A0A0G2JKD1 596 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 ZNF138P52744 262 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 TWIST1Q15672 202 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 GUK1Q16774 197 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 CFAP126Q5VTH2 177 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 ENHOQ6UWT2 76 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 COX8CQ7Z4L0 72 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 C15orf54Q8N8G6 183 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 CYB561D1Q8N8Q1 229 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 TMEM75Q8N9X5 138 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 RNF185Q96GF1 192 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 CIB3Q96Q77 187 aaPredicted RBP2.96□□□□□ -1.94
LIMS1-214ENST00000542845 SAMD10Q9BYL1 202 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 SLC39A9Q9NUM3 307 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 PSENENQ9NZ42 101 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 CCDC59Q9P031 241 aaKnown RBP2.96□□□□□ -1.94
LIMS1-214ENST00000542845 ZNF492Q9P255 531 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 SHPKQ9UHJ6 478 aa2.96□□□□□ -1.94
LIMS1-214ENST00000542845 TRBV19A0A075B6N1 114 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.95□□□□□ -1.94
LIMS1-214ENST00000542845 DISC1C4P0D8 188 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 HPGDSO60760 199 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 ANGP03950 147 aaKnown RBP2.95□□□□□ -1.94
LIMS1-214ENST00000542845 NMBP08949 121 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 PYYP10082 97 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 ANXA3P12429 323 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 INPP1P49441 399 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 TAS2R19P59542 299 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 CACNG7P62955 275 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 CIRBPQ14011 172 aaKnown RBP2.95□□□□□ -1.94
LIMS1-214ENST00000542845 CLPSL2Q6UWE3 100 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 ERASQ7Z444 233 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 ZNF546Q86UE3 836 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 STPG4Q8N801 248 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 TMEM229BQ8NBD8 167 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 SPACA4Q8TDM5 124 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 ATP5SQ99766 215 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 PLAC8Q9NZF1 115 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 Q9UF83 564 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 PRELID1Q9Y255 219 aa2.95□□□□□ -1.94
LIMS1-214ENST00000542845 F8WDY8 70 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 APOA1P02647 267 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 TYMSP04818 313 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 METTL15P1P0C7V9 234 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 MGST1P10620 155 aaKnown RBP2.94□□□□□ -1.94
LIMS1-214ENST00000542845 TBPP20226 339 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 RAB5CP51148 216 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 CAV2P51636 162 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 COX6A2Q02221 97 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 SRSF9Q13242 221 aaKnown RBP eCLIP2.94□□□□□ -1.94
LIMS1-214ENST00000542845 ZNF266Q14584 549 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 ATRAIDQ6UW56 229 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 Q6ZRG5 221 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 OR10G9Q8NGN4 311 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 OR2G3Q8NGZ4 309 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 MTFP1Q9UDX5 166 aa2.94□□□□□ -1.94
LIMS1-214ENST00000542845 IGLV10-54A0A075B6I4 117 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 A0A087WZ39 114 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 SSSCA1O60232 199 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 TSPAN13O95857 204 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 IFNA7P01567 189 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 TCRBP04435 133 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 IGKV2-30P06310 120 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 NEDD8Q15843 81 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 LGALSLQ3ZCW2 172 aaPredicted RBP2.93□□□□□ -1.94
LIMS1-214ENST00000542845 MIC13Q5XKP0 118 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 IZUMO2Q6UXV1 221 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 CLVS1Q8IUQ0 354 aaPredicted RBP2.93□□□□□ -1.94
LIMS1-214ENST00000542845 ZNF664Q8N3J9 261 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms