RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 RRN3P1Q2M238 152 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 APRG1Q8IVJ8 170 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
NPC1-202ENST00000540608 POM121L12Q8N7R1 296 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 PRSS29PA6NIE9 313 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 GNRH2O43555 120 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 MGPP08493 103 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 DEFB1P60022 68 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
NPC1-202ENST00000540608 COL12A1Q99715 3063 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 AGRNO00468 2067 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 TRBV7-9A0A0J9YWB2 115 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 H3BMG7 143 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 BRI3O95415 125 aa9.28□□□□□ -0.92
NPC1-202ENST00000540608 LGALS1P09382 135 aaKnown RBP9.28□□□□□ -0.92
NPC1-202ENST00000540608 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
NPC1-202ENST00000540608 USMG5Q96IX5 58 aa9.27□□□□□ -0.93
NPC1-202ENST00000540608 ABCA2Q9BZC7 2435 aa9.27□□□□□ -0.93
NPC1-202ENST00000540608 PIEZO1Q92508 2521 aa9.27□□□□□ -0.93
NPC1-202ENST00000540608 HOXA3O43365 443 aaPredicted RBP9.27□□□□□ -0.93
NPC1-202ENST00000540608 PRADC1Q9BSG0 188 aa9.27□□□□□ -0.93
NPC1-202ENST00000540608 CYSLTR1Q9Y271 337 aa9.27□□□□□ -0.93
NPC1-202ENST00000540608 CACNA1AO00555 2505 aa9.27□□□□□ -0.93
NPC1-202ENST00000540608 IGHV1-69DA0A0B4J2H0 117 aa9.26□□□□□ -0.93
NPC1-202ENST00000540608 IGHV1-69P01742 117 aa9.26□□□□□ -0.93
NPC1-202ENST00000540608 IGHV4-39P01824 125 aa9.26□□□□□ -0.93
NPC1-202ENST00000540608 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
NPC1-202ENST00000540608 F6UB75 175 aa9.26□□□□□ -0.93
NPC1-202ENST00000540608 H3BUA1 57 aa9.26□□□□□ -0.93
NPC1-202ENST00000540608 NXPH4O95158 308 aa9.26□□□□□ -0.93
NPC1-202ENST00000540608 GNLYP22749 145 aa9.26□□□□□ -0.93
NPC1-202ENST00000540608 GAGE13Q4V321 117 aa9.26□□□□□ -0.93
NPC1-202ENST00000540608 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
NPC1-202ENST00000540608 BRD3OSQ6XYD6 125 aa9.25□□□□□ -0.93
NPC1-202ENST00000540608 KIF25-AS1Q9Y6Z4 181 aa9.25□□□□□ -0.93
NPC1-202ENST00000540608 IGHV4OR15-8A0A075B7B6 117 aa9.25□□□□□ -0.93
NPC1-202ENST00000540608 A0A087WW49 117 aa9.25□□□□□ -0.93
NPC1-202ENST00000540608 J3QR89 54 aa9.25□□□□□ -0.93
NPC1-202ENST00000540608 LINC00315P59091 139 aa9.25□□□□□ -0.93
NPC1-202ENST00000540608 RPL32P62910 135 aaKnown RBP9.25□□□□□ -0.93
NPC1-202ENST00000540608 MORN3Q6PF18 240 aaPredicted RBP9.25□□□□□ -0.93
NPC1-202ENST00000540608 PRO0461Q9UI25 63 aa9.25□□□□□ -0.93
NPC1-202ENST00000540608 CRYGDP07320 174 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 COX6B1P14854 86 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 SCGB2A2Q13296 93 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 CD300EQ496F6 205 aaPredicted RBP9.24□□□□□ -0.93
NPC1-202ENST00000540608 MAP1AP78559 2803 aaPredicted RBP9.24□□□□□ -0.93
NPC1-202ENST00000540608 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 IGHG2P01859 326 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 RHPN1-AS1Q9BWJ2 59 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 LINC01549A6NIU2 74 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 IGHV3-11P01762 117 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 SAMD13Q5VXD3 122 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 SIGMAR1Q99720 223 aa9.24□□□□□ -0.93
NPC1-202ENST00000540608 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 A6NJY4 79 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
NPC1-202ENST00000540608 ETDBQ3ZM63 59 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 SH2D6Q7Z4S9 175 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 SPTAN1Q13813 2472 aaKnown RBP9.23□□□□□ -0.93
NPC1-202ENST00000540608 IGKV3-7A0A075B6H7 116 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 KLLNB2CW77 178 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 TSHBP01222 138 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 PAPPA-AS1Q5QFB9 102 aa9.23□□□□□ -0.93
NPC1-202ENST00000540608 TSSC4Q9Y5U2 329 aaPredicted RBP9.23□□□□□ -0.93
NPC1-202ENST00000540608 CELSR2Q9HCU4 2923 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 IGHV4-61A0A0C4DH41 118 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 IGIPA6NJ69 53 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
NPC1-202ENST00000540608 SCGB1D4Q6XE38 83 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 PLEKHB2Q96CS7 222 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 SPAG8Q99932 426 aaPredicted RBP9.22□□□□□ -0.93
NPC1-202ENST00000540608 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 PF4V1P10720 104 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 SCGB1A1P11684 91 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 AZU1P20160 251 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 ZFP2Q6ZN57 461 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
NPC1-202ENST00000540608 C11orf86A6NJI1 115 aa9.21□□□□□ -0.93
NPC1-202ENST00000540608 VCYO14598 125 aa9.21□□□□□ -0.93
NPC1-202ENST00000540608 UBE2D1P51668 147 aa9.21□□□□□ -0.93
NPC1-202ENST00000540608 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.93
NPC1-202ENST00000540608 LY6EQ16553 131 aa9.21□□□□□ -0.93
NPC1-202ENST00000540608 FAM159AQ6UWV7 190 aa9.21□□□□□ -0.93
NPC1-202ENST00000540608 KLHL30-AS1Q8NEE0 82 aa9.21□□□□□ -0.93
NPC1-202ENST00000540608 TMEM141Q96I45 108 aa9.21□□□□□ -0.93
NPC1-202ENST00000540608 TP53TG1Q9Y2A0 90 aa9.21□□□□□ -0.93
NPC1-202ENST00000540608 A6NDX4 124 aa9.21□□□□□ -0.94
NPC1-202ENST00000540608 IGHV4-38-2P0DP08 117 aa9.21□□□□□ -0.94
NPC1-202ENST00000540608 PMVKQ15126 192 aa9.21□□□□□ -0.94
NPC1-202ENST00000540608 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.94
NPC1-202ENST00000540608 GTSF1LQ9H1H1 148 aa9.21□□□□□ -0.94
NPC1-202ENST00000540608 DAZ1Q9NQZ3 744 aaKnown RBP9.21□□□□□ -0.94
NPC1-202ENST00000540608 MRPL16Q9NX20 251 aaKnown RBP9.21□□□□□ -0.94
NPC1-202ENST00000540608 MUC4Q99102 2169 aa9.21□□□□□ -0.94
NPC1-202ENST00000540608 HERVK_113P61574 105 aa9.2□□□□□ -0.94
NPC1-202ENST00000540608 SPATA25Q9BR10 227 aa9.2□□□□□ -0.94
NPC1-202ENST00000540608 IGLV1-40P01703 118 aa9.2□□□□□ -0.94
NPC1-202ENST00000540608 SRD5A1P18405 259 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms