RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 HIGD1CA8MV81 97 aa13.57□□□□□ -0.24
TNFRSF1A-213ENST00000540022 SNAI2O43623 268 aa13.57□□□□□ -0.24
TNFRSF1A-213ENST00000540022 NHLRC4P0CG21 123 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-213ENST00000540022 MED14OSP0DP75 135 aa13.57□□□□□ -0.24
TNFRSF1A-213ENST00000540022 LYZL1Q6UWQ5 148 aa13.57□□□□□ -0.24
TNFRSF1A-213ENST00000540022 MUC21A0A0G2JKD1 596 aa13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 MUC21A0A140T8X8 626 aa13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 OR5AL1P0C617 328 aa13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 EMP1P54849 157 aa13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 FAM3BP58499 235 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 PGLYRP4Q96LB8 373 aa13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 ZMAT4Q9H898 229 aa13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 NAT8BQ9UHF3 227 aa13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 NBEAL2Q6ZNJ1 2754 aa13.56□□□□□ -0.24
TNFRSF1A-213ENST00000540022 SNURFLB1AK76 121 aa13.55□□□□□ -0.24
TNFRSF1A-213ENST00000540022 CTRLP40313 264 aa13.55□□□□□ -0.24
TNFRSF1A-213ENST00000540022 NUP35Q8NFH5 326 aa13.55□□□□□ -0.24
TNFRSF1A-213ENST00000540022 OR10AG1Q8NH19 301 aa13.55□□□□□ -0.24
TNFRSF1A-213ENST00000540022 TENM3Q9P273 2699 aa13.55□□□□□ -0.24
TNFRSF1A-213ENST00000540022 DAZ2Q13117 558 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 SPXQ9BT56 116 aa13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 NOP10Q9NPE3 64 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 F2Z2F3 143 aa13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 SSTP61278 116 aa13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 IMMP2LQ96T52 175 aa13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 PHLDA3Q9Y5J5 127 aa13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 URGCP-MRPS24S4R325 110 aa13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 U3KQK5 164 aa13.54□□□□□ -0.24
TNFRSF1A-213ENST00000540022 DNAH7Q8WXX0 4024 aa13.52□□□□□ -0.24
TNFRSF1A-213ENST00000540022 KMT2CQ8NEZ4 4911 aaKnown RBP13.52□□□□□ -0.24
TNFRSF1A-213ENST00000540022 M0R2P5 195 aa13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 M0R381 172 aa13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 SPINK4O60575 86 aa13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 SCO1O75880 301 aa13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 DMRTA1Q5VZB9 504 aa13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 TMEM88Q6PEY1 159 aa13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 WWC2-AS2Q96NR7 200 aa13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 CNFNQ9BYD5 112 aa13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 MRPL16Q9NX20 251 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-213ENST00000540022 CXorf65A6NEN9 183 aa13.51□□□□□ -0.25
TNFRSF1A-213ENST00000540022 KCNIP4Q6PIL6 250 aa13.51□□□□□ -0.25
TNFRSF1A-213ENST00000540022 CBLN2Q8IUK8 224 aa13.51□□□□□ -0.25
TNFRSF1A-213ENST00000540022 A0A0J9YWU9 116 aa13.5□□□□□ -0.25
TNFRSF1A-213ENST00000540022 NXPH4O95158 308 aa13.5□□□□□ -0.25
TNFRSF1A-213ENST00000540022 ZNF876PQ49A33 203 aa13.5□□□□□ -0.25
TNFRSF1A-213ENST00000540022 FAM222AQ5U5X8 452 aa13.5□□□□□ -0.25
TNFRSF1A-213ENST00000540022 SPANXN1Q5VSR9 72 aa13.5□□□□□ -0.25
TNFRSF1A-213ENST00000540022 Q6ZTI0 123 aa13.5□□□□□ -0.25
TNFRSF1A-213ENST00000540022 C11orf68Q9H3H3 251 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-213ENST00000540022 MSRB1Q9NZV6 116 aa13.5□□□□□ -0.25
TNFRSF1A-213ENST00000540022 IGHV4-4A0A075B6R2 117 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 TRGV1A0A0A0MS02 117 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 A0A1B0GUT8 65 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 NTF3P20783 257 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 S100PP25815 95 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 WDR73Q6P4I2 378 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 ZFP82Q8N141 532 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 SMCO4Q9NRQ5 59 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 DKK2Q9UBU2 259 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 CELA1Q9UNI1 258 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 CACNG7P62955 275 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 LGALS9BQ3B8N2 356 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 SYT8Q8NBV8 401 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 RASL10AQ92737 203 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 PTH2Q96A98 100 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 BORCS7Q96B45 105 aa13.49□□□□□ -0.25
TNFRSF1A-213ENST00000540022 LYRM9A8MSI8 78 aa13.48□□□□□ -0.25
TNFRSF1A-213ENST00000540022 ELOBQ15370 118 aa13.48□□□□□ -0.25
TNFRSF1A-213ENST00000540022 MRPL54Q6P161 138 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-213ENST00000540022 GAGE12BA1L429 117 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 GAGE7O76087 117 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 GAGE12FP0CL80 117 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 GAGE12GP0CL81 117 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 GAGE12IP0CL82 117 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 TWIST1Q15672 202 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 LINC00612Q8N6U2 182 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 BTF3L4Q96K17 158 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 YPEL4Q96NS1 127 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 JPT2Q9H910 190 aa13.47□□□□□ -0.25
TNFRSF1A-213ENST00000540022 TRAV9-1A0A075B6T8 112 aa13.46□□□□□ -0.25
TNFRSF1A-213ENST00000540022 SPART-AS1P0CW21 52 aa13.46□□□□□ -0.25
TNFRSF1A-213ENST00000540022 RIGQ13278 110 aa13.46□□□□□ -0.25
TNFRSF1A-213ENST00000540022 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
TNFRSF1A-213ENST00000540022 TGIF2-C20orf24A0A0A6YYL0 155 aa13.45□□□□□ -0.26
TNFRSF1A-213ENST00000540022 A0A1B0GXF2 115 aa13.45□□□□□ -0.26
TNFRSF1A-213ENST00000540022 DEFB130BP0DP73 79 aa13.45□□□□□ -0.26
TNFRSF1A-213ENST00000540022 DEFB130AP0DP74 79 aa13.45□□□□□ -0.26
TNFRSF1A-213ENST00000540022 MUC4Q99102 2169 aa13.45□□□□□ -0.26
TNFRSF1A-213ENST00000540022 ATP5L2Q7Z4Y8 100 aa13.44□□□□□ -0.26
TNFRSF1A-213ENST00000540022 POM121L12Q8N7R1 296 aa13.44□□□□□ -0.26
TNFRSF1A-213ENST00000540022 CAMPP49913 170 aa13.44□□□□□ -0.26
TNFRSF1A-213ENST00000540022 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
TNFRSF1A-213ENST00000540022 SAMD10Q9BYL1 202 aa13.44□□□□□ -0.26
TNFRSF1A-213ENST00000540022 EVI2AP22794 236 aa13.43□□□□□ -0.26
TNFRSF1A-213ENST00000540022 HBBP68871 147 aa13.43□□□□□ -0.26
TNFRSF1A-213ENST00000540022 TRBV24-1A0A075B6N3 115 aa13.42□□□□□ -0.26
TNFRSF1A-213ENST00000540022 TRGV2A0A075B6R0 118 aa13.42□□□□□ -0.26
TNFRSF1A-213ENST00000540022 A0A087WWL8 130 aa13.42□□□□□ -0.26
TNFRSF1A-213ENST00000540022 TEX48A0A1B0GUV7 120 aa13.42□□□□□ -0.26
TNFRSF1A-213ENST00000540022 RS1O15537 224 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms