RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 TMEM200BQ69YZ2 307 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 MUSTN1Q8IVN3 82 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 THAP8Q8NA92 274 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 PRDM6Q9NQX0 595 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 KLK9Q9UKQ9 250 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 IGHV1-46P01743 117 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 Q8N1Y9 231 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 SRRM5B3KS81 715 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 CFHR3Q02985 330 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 IGHV3-38A0A0C4DH36 116 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 NDUFS5O43920 106 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 CRYGCP07315 174 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 ZNRD1Q9P1U0 126 aa4.51□□□□□ -1.69
CSMD1-215ENST00000537824 CD177Q8N6Q3 437 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 Q9H8V8 135 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 IGHV1-3A0A0C4DH29 117 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 ODF1Q14990 250 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 DAND5Q8N907 189 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 PATE3B3GLJ2 98 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 F5H768 121 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 NXPH4O95158 308 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 BAALCQ8WXS3 180 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 E9PLD3 99 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 ZFP2Q6ZN57 461 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 GGNQ86UU5 652 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 UBE2E2Q96LR5 201 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 IGHV4-4A0A075B6R2 117 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 RBAKDNA6NC62 111 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 IL15RAQ13261 267 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 PINLYPA6NC86 204 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 COLQQ9Y215 455 aaPredicted RBP4.5□□□□□ -1.69
CSMD1-215ENST00000537824 NKAPP1Q8N9T2 125 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 PRR25Q96S07 402 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 TMEM14CQ9P0S9 112 aa4.5□□□□□ -1.69
CSMD1-215ENST00000537824 LGALS9O00182 355 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 NDUFA4L2Q9NRX3 87 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 IGHV1OR15-1A0A075B7D0 117 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 PRR30Q53SZ7 412 aaPredicted RBP4.49□□□□□ -1.69
CSMD1-215ENST00000537824 C20orf197Q8N268 126 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 FLVCR1-AS1Q8TAF5 88 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 VMO1Q7Z5L0 202 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 C1orf210Q8IVY1 113 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 E9PLN8 166 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 FHL1Q13642 323 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 ZFP36L1Q07352 338 aaKnown RBP4.49□□□□□ -1.69
CSMD1-215ENST00000537824 TMEM61Q8N0U2 210 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 DEFB105AQ8NG35 78 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 UNC79Q9P2D8 2635 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 UPK3BQ9BT76 320 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 COL27A1Q8IZC6 1860 aaPredicted RBP4.49□□□□□ -1.69
CSMD1-215ENST00000537824 TRAV4A0A0B4J268 109 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 ZNF134P52741 427 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 LTBP1Q14766 1721 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 GTSF1Q8WW33 167 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 H3BT86 120 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 PF4P02776 101 aa4.49□□□□□ -1.69
CSMD1-215ENST00000537824 CSDC2Q9Y534 153 aaKnown RBP4.49□□□□□ -1.69
CSMD1-215ENST00000537824 IGHV4-28A0A0C4DH34 117 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 LINC00694P0DN24 101 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 IGHV1-8P0DP01 117 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 SPINK13Q1W4C9 94 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 C1orf147Q96MC9 270 aaPredicted RBP4.48□□□□□ -1.69
CSMD1-215ENST00000537824 GAFA1Q96PS6 74 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 WISP1O95388 367 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 C14orf132Q9NPU4 83 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 IGKV1D-17A0A075B6S4 117 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 ARTNQ5T4W7 220 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 MRPL14Q6P1L8 145 aaKnown RBP4.48□□□□□ -1.69
CSMD1-215ENST00000537824 HRCT1Q6UXD1 115 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 SPRR3Q9UBC9 169 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 CHD6Q8TD26 2715 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 CENPVL3A0A0U1RRI6 287 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 COL4A5P29400 1685 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 LMO1P25800 156 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 IGFBPL1Q8WX77 278 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 SPRY2O43597 315 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 DYNAPQ8N1N2 210 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 SLC25A29Q8N8R3 303 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 FANCD2OSQ96PS1 177 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 C20orf173Q96LM9 149 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.48□□□□□ -1.69
CSMD1-215ENST00000537824 IGKV2-29A2NJV5 120 aaPredicted RBP4.48□□□□□ -1.69
CSMD1-215ENST00000537824 LOXL1Q08397 574 aaPredicted RBP4.48□□□□□ -1.69
CSMD1-215ENST00000537824 CXCL5P42830 114 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 CLPSL2Q6UWE3 100 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 VSIG2Q96IQ7 327 aa4.48□□□□□ -1.69
CSMD1-215ENST00000537824 FAM27E3Q08E93 113 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 PIP4P2Q8N4L2 257 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 ETV2O00321 342 aaPredicted RBP4.47□□□□□ -1.69
CSMD1-215ENST00000537824 FOXE3Q13461 319 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 C8orf31Q8N9H6 132 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 TEX36Q5VZQ5 186 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 IGHV1-18A0A0C4DH31 117 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 NBEAL1Q6ZS30 2694 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 PIFOQ8TCI5 191 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 MLST8Q9BVC4 326 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 C10orf105Q8TEF2 133 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 COL6A5A8TX70 2615 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 TMEM178BH3BS89 294 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms