RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 Q6ZS92 163 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 PPDPFLQ8WWR9 84 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 IFI27L1Q96BM0 104 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 PHLPP1O60346 1717 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 ZNF462Q96JM2 2506 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 CNTLNQ9NXG0 1405 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 MICAL3Q7RTP6 2002 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 CHD6Q8TD26 2715 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 CCKP06307 115 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 RNASE3P12724 160 aaKnown RBP1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 C10orf82Q8WW14 230 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 AP4S1Q9Y587 144 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 IER3IP1Q9Y5U9 82 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 TANC2Q9HCD6 1990 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 ERBINQ96RT1 1412 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 HEATR5BQ9P2D3 2071 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 RP1P56715 2156 aa1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 EIF4G3O43432 1585 aaKnown RBP1.3□□□□□ -2.2
SRGAP1-203ENST00000537585 SMARCA4P51532 1647 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 TRPM1Q7Z4N2 1603 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 PDE4DIPQ5VU43 2346 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 LAMB4A4D0S4 1761 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 UBR2Q8IWV8 1755 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 SPEF2Q9C093 1822 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 ANKRD11Q6UB99 2663 aaPredicted RBP1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 TRAV12-3A0A0B4J271 114 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 PIGBOS1A0A0B4J2F0 54 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 NUPR1O60356 82 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 MPC2O95563 127 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 TNFP01375 233 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 CBLN1P23435 193 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 GNG2P59768 71 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 BTG2P78543 158 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 C9orf116Q5BN46 136 aaPredicted RBP1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 Q86TA4 180 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 ACBD7Q8N6N7 88 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 TMEM106BQ9NUM4 274 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 CFTRP13569 1480 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 PZPP20742 1482 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 ZNF518AQ6AHZ1 1483 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 FAM135AQ9P2D6 1515 aa1.29□□□□□ -2.2
SRGAP1-203ENST00000537585 SPTBN5Q9NRC6 3674 aaKnown RBP1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 FLNBO75369 2602 aaKnown RBP1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 TEP1Q99973 2627 aaKnown RBP1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 TRBV10-1A0A0K0K1A3 114 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 LOC101927531A0A1B0GV80 90 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 NUPR2A6NF83 97 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 FXYD1O00168 92 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 IGLV3-1P01715 115 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 GYPBP06028 91 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 RPL37AP61513 92 aaKnown RBP1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 COL5A1-AS1Q5SY13 56 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 KRTAP26-1Q6PEX3 210 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 CYP2G1PQ6ZSU1 146 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 Q8N8P6 123 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 LINC00526Q96FQ7 95 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 MYOM2P54296 1465 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 NESP48681 1621 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 VIRMAQ69YN4 1812 aaKnown RBP1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 SBF1O95248 1867 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 NAV2Q8IVL1 2488 aa1.28□□□□□ -2.2
SRGAP1-203ENST00000537585 ANKRD17O75179 2603 aaKnown RBP1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 PTPN13Q12923 2485 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 MPDZO75970 2070 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 ZSWIM8A7E2V4 1837 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 COL11A1P12107 1806 aaPredicted RBP1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 NALCNQ8IZF0 1738 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 HMGXB3Q12766 1538 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 TRAV13-2A0A0B4J235 113 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 HCG22E2RYF7 251 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 GNGT2O14610 69 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 IGHV3-33P01772 117 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 FXYD4P59646 89 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 GNG11P61952 73 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 UBA52P62987 128 aaKnown RBP1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 DEFB103AP81534 67 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 SPATA45Q537H7 98 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 C10orf128Q5T292 105 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 C12orf73Q69YU5 71 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 LINC00322Q6ZN03 302 aaPredicted RBP1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 LINC00299Q6ZSB3 139 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 TTC9CQ8N5M4 171 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 TSLPQ969D9 159 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 DMAC1Q96GE9 116 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 OBSCN-AS1Q96MR7 158 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 SPANXDQ9BXN6 97 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 BDP1A6H8Y1 2624 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 BAZ2BQ9UIF8 2168 aaKnown RBP1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 PCNX2A6NKB5 2137 aa1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 HELZP42694 1942 aaKnown RBP1.27□□□□□ -2.21
SRGAP1-203ENST00000537585 KIF13AQ9H1H9 1805 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 COL24A1Q17RW2 1714 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 THOC2Q8NI27 1593 aaKnown RBP1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 DISP1Q96F81 1524 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 A2ML1A8K2U0 1454 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 IQSEC2Q5JU85 1478 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 VCANP13611 3396 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 CACNA1BQ00975 2339 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 COL6A3P12111 3177 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms