RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TRAV9-1A0A075B6T8 112 aa11.31□□□□□ -0.6
SFSWAP-206ENST00000537582 IGHV3-16A0A0C4DH30 117 aa11.31□□□□□ -0.6
SFSWAP-206ENST00000537582 SMIM27A0A1W2PRY6 76 aa11.31□□□□□ -0.6
SFSWAP-206ENST00000537582 RNASE3P12724 160 aaKnown RBP11.31□□□□□ -0.6
SFSWAP-206ENST00000537582 SSTP61278 116 aa11.31□□□□□ -0.6
SFSWAP-206ENST00000537582 HIST3H2BBQ8N257 126 aa11.31□□□□□ -0.6
SFSWAP-206ENST00000537582 TMEM256Q8N2U0 113 aa11.31□□□□□ -0.6
SFSWAP-206ENST00000537582 X6R8D5 127 aa11.31□□□□□ -0.6
SFSWAP-206ENST00000537582 IFITM10A6NMD0 228 aa11.3□□□□□ -0.6
SFSWAP-206ENST00000537582 HIGD1CA8MV81 97 aa11.3□□□□□ -0.6
SFSWAP-206ENST00000537582 A8MWL6 223 aa11.3□□□□□ -0.6
SFSWAP-206ENST00000537582 SPINK4O60575 86 aa11.3□□□□□ -0.6
SFSWAP-206ENST00000537582 IGLC6P0CF74 106 aa11.3□□□□□ -0.6
SFSWAP-206ENST00000537582 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
SFSWAP-206ENST00000537582 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
SFSWAP-206ENST00000537582 RCHY1Q96PM5 261 aa11.3□□□□□ -0.6
SFSWAP-206ENST00000537582 A0A1W2PPQ1 181 aa11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 ASIPP42127 132 aa11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 RPS20P60866 119 aaKnown RBP11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 COA6Q5JTJ3 125 aaKnown RBP11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 C11orf72Q8NBR9 251 aa11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 RNF183Q96D59 192 aa11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 LINC00467Q9BRT7 94 aa11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 GSN-AS1Q9NRJ2 163 aa11.29□□□□□ -0.6
SFSWAP-206ENST00000537582 S100A2P29034 98 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 Q6ZWC4 215 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 NUP35Q8NFH5 326 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 OR11H2Q8NH07 326 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 RNASE8Q8TDE3 154 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 PLAC8L1A1L4L8 177 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 S100A4P26447 101 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 DEFA6Q01524 100 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 OR10AG1Q8NH19 301 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
SFSWAP-206ENST00000537582 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
SFSWAP-206ENST00000537582 PCP4L1A6NKN8 68 aa11.27□□□□□ -0.61
SFSWAP-206ENST00000537582 DEFB4AO15263 64 aa11.27□□□□□ -0.61
SFSWAP-206ENST00000537582 DNLZQ5SXM8 178 aa11.27□□□□□ -0.61
SFSWAP-206ENST00000537582 GFRA4Q9GZZ7 299 aa11.27□□□□□ -0.61
SFSWAP-206ENST00000537582 CTRLP40313 264 aa11.26□□□□□ -0.61
SFSWAP-206ENST00000537582 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
SFSWAP-206ENST00000537582 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
SFSWAP-206ENST00000537582 SCRT2Q9NQ03 307 aa11.26□□□□□ -0.61
SFSWAP-206ENST00000537582 NAT8BQ9UHF3 227 aa11.26□□□□□ -0.61
SFSWAP-206ENST00000537582 SNAI2O43623 268 aa11.25□□□□□ -0.61
SFSWAP-206ENST00000537582 EMP1P54849 157 aa11.25□□□□□ -0.61
SFSWAP-206ENST00000537582 FOXA3P55318 350 aaPredicted RBP11.25□□□□□ -0.61
SFSWAP-206ENST00000537582 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
SFSWAP-206ENST00000537582 TMEM263Q8WUH6 116 aaKnown RBP11.25□□□□□ -0.61
SFSWAP-206ENST00000537582 SSBP4Q9BWG4 385 aaPredicted RBP11.25□□□□□ -0.61
SFSWAP-206ENST00000537582 MSRB1Q9NZV6 116 aa11.25□□□□□ -0.61
SFSWAP-206ENST00000537582 IGHV4-28A0A0C4DH34 117 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 IL17DQ8TAD2 202 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 TENM3Q9P273 2699 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 FAM231BA6NCW3 169 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 M0R381 172 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 OR5AL1P0C617 328 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 Q8NAQ8 132 aa11.24□□□□□ -0.61
SFSWAP-206ENST00000537582 PYY3Q5JQD4 70 aa11.23□□□□□ -0.61
SFSWAP-206ENST00000537582 DMRTA1Q5VZB9 504 aa11.23□□□□□ -0.61
SFSWAP-206ENST00000537582 C16orf74Q96GX8 76 aa11.23□□□□□ -0.61
SFSWAP-206ENST00000537582 TM2D3Q9BRN9 247 aa11.23□□□□□ -0.61
SFSWAP-206ENST00000537582 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
SFSWAP-206ENST00000537582 MRPL16Q9NX20 251 aaKnown RBP11.23□□□□□ -0.61
SFSWAP-206ENST00000537582 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
SFSWAP-206ENST00000537582 MUC4Q99102 2169 aa11.22□□□□□ -0.61
SFSWAP-206ENST00000537582 MED14OSP0DP75 135 aa11.22□□□□□ -0.61
SFSWAP-206ENST00000537582 OR10D4PQ8NGN7 298 aa11.22□□□□□ -0.61
SFSWAP-206ENST00000537582 TP53TG1Q9Y2A0 90 aa11.22□□□□□ -0.61
SFSWAP-206ENST00000537582 A0A1B0GUT8 65 aa11.21□□□□□ -0.61
SFSWAP-206ENST00000537582 NTF3P20783 257 aa11.21□□□□□ -0.61
SFSWAP-206ENST00000537582 SPANXN1Q5VSR9 72 aa11.21□□□□□ -0.61
SFSWAP-206ENST00000537582 HIST1H2BLQ99880 126 aa11.21□□□□□ -0.61
SFSWAP-206ENST00000537582 CNFNQ9BYD5 112 aa11.21□□□□□ -0.61
SFSWAP-206ENST00000537582 JPT2Q9H910 190 aa11.21□□□□□ -0.61
SFSWAP-206ENST00000537582 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 F2Z2F3 143 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 CAMPP49913 170 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 TWIST1Q15672 202 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 ZNF493Q6ZR52 646 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 Q6ZTI0 123 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 TRAPPC1Q9Y5R8 145 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 SNURFLB1AK76 121 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 NXPH4O95158 308 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 MIFP14174 115 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 ZNF876PQ49A33 203 aa11.2□□□□□ -0.62
SFSWAP-206ENST00000537582 HUWE1Q7Z6Z7 4374 aaKnown RBP11.19□□□□□ -0.62
SFSWAP-206ENST00000537582 TRGV1A0A0A0MS02 117 aa11.19□□□□□ -0.62
SFSWAP-206ENST00000537582 M0R2P5 195 aa11.19□□□□□ -0.62
SFSWAP-206ENST00000537582 FABP4P15090 132 aa11.19□□□□□ -0.62
SFSWAP-206ENST00000537582 COX19Q49B96 90 aa11.19□□□□□ -0.62
SFSWAP-206ENST00000537582 PACRGQ96M98 296 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms