RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 NOTCH1P46531 2555 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 A0A1B0GXF2 115 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 RBMY1BA6NDE4 496 aaKnown RBP4.74□□□□□ -1.65
CDCA3-205ENST00000535871 RBMY1EA6NEQ0 496 aaKnown RBP4.74□□□□□ -1.65
CDCA3-205ENST00000535871 GAGE10A6NGK3 116 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 COLCA2A8K830 154 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 M0R2Z0 102 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 HLA-DQA1P01909 254 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 GIG44P09565 113 aaPredicted RBP4.74□□□□□ -1.65
CDCA3-205ENST00000535871 RBMY1DP0C7P1 496 aaKnown RBP4.74□□□□□ -1.65
CDCA3-205ENST00000535871 RNASE4P34096 147 aaKnown RBP4.74□□□□□ -1.65
CDCA3-205ENST00000535871 RIGQ13278 110 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 BTN1A1Q13410 526 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 PRR9Q5T870 116 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 NUP35Q8NFH5 326 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 TMEM263Q8WUH6 116 aaKnown RBP4.74□□□□□ -1.65
CDCA3-205ENST00000535871 GTSF1Q8WW33 167 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 FAM210BQ96KR6 192 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 SRD5A3Q9H8P0 318 aa4.74□□□□□ -1.65
CDCA3-205ENST00000535871 TRAV12-3A0A0B4J271 114 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 IGHV4-30-4P0DP06 118 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 RAB5AP20339 215 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 S100A4P26447 101 aaKnown RBP4.73□□□□□ -1.65
CDCA3-205ENST00000535871 DEFB1P60022 68 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 HBBP68871 147 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 DAZ2Q13117 558 aaKnown RBP4.73□□□□□ -1.65
CDCA3-205ENST00000535871 LGALS9BQ3B8N2 356 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 TMEM88Q6PEY1 159 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 CBLN2Q8IUK8 224 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 DEFB125Q8N687 156 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 C16orf74Q96GX8 76 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 C9orf85Q96MD7 179 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 C18orf15Q96N68 181 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 C11orf21Q9P2W6 132 aa4.73□□□□□ -1.65
CDCA3-205ENST00000535871 IGHV3-16A0A0C4DH30 117 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 TEX48A0A1B0GUV7 120 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 CA1P00915 261 aaPredicted RBP4.72□□□□□ -1.65
CDCA3-205ENST00000535871 PPBPP02775 128 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 TRGC1P0CF51 173 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 RNASE3P12724 160 aaKnown RBP4.72□□□□□ -1.65
CDCA3-205ENST00000535871 MIFP14174 115 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 TCL1AP56279 114 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 SMIM15Q7Z3B0 74 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 ZFP82Q8N141 532 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 C1orf158Q8N1D5 194 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 SYT8Q8NBV8 401 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 RNASE8Q8TDE3 154 aaKnown RBP4.72□□□□□ -1.65
CDCA3-205ENST00000535871 RASL10AQ92737 203 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 TMEM191AQ9H0A3 160 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 XCL2Q9UBD3 114 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 SELENOKQ9Y6D0 94 aa4.72□□□□□ -1.65
CDCA3-205ENST00000535871 TRAV12-2A0A075B6T6 113 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 M0R2P5 195 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 SPRY2O43597 315 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 PPP1R17O96001 155 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 IGKV3-20P01619 116 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 ARMS2P0C7Q2 107 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 KRTAP10-11P60412 298 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 ZNF124Q15973 351 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 RRN3P1Q2M238 152 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 LYZL1Q6UWQ5 148 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 C11orf72Q8NBR9 251 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 IL17DQ8TAD2 202 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 RNF183Q96D59 192 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 LINC01587Q99440 93 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 OVOL2Q9BRP0 275 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 TMEM208Q9BTX3 173 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 EDA2RQ9HAV5 297 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 LAMTOR2Q9Y2Q5 125 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 PHLDA3Q9Y5J5 127 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 URGCP-MRPS24S4R325 110 aa4.71□□□□□ -1.66
CDCA3-205ENST00000535871 CBY3A6NI87 242 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 A8MWV9 139 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 G3V4G9 280 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 RHODO00212 210 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 PHOX2AO14813 284 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 SCO1O75880 301 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 RBMY1A1P0DJD3 496 aaKnown RBP4.7□□□□□ -1.66
CDCA3-205ENST00000535871 RBMY1CP0DJD4 496 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 NTF3P20783 257 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 RBMY1FQ15415 496 aaKnown RBP4.7□□□□□ -1.66
CDCA3-205ENST00000535871 SPANXN1Q5VSR9 72 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 ZFP2Q6ZN57 461 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 TMEM136Q6ZRR5 245 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 POM121L12Q8N7R1 296 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 PGLYRP4Q96LB8 373 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 AP1S3Q96PC3 154 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 RCHY1Q96PM5 261 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 WFDC10AQ9H1F0 79 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 GSN-AS1Q9NRJ2 163 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 NAGKQ9UJ70 344 aa4.7□□□□□ -1.66
CDCA3-205ENST00000535871 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
CDCA3-205ENST00000535871 TGIF2-C20orf24A0A0A6YYL0 155 aa4.69□□□□□ -1.66
CDCA3-205ENST00000535871 LYRM9A8MSI8 78 aa4.69□□□□□ -1.66
CDCA3-205ENST00000535871 SNURFLB1AK76 121 aa4.69□□□□□ -1.66
CDCA3-205ENST00000535871 H3BVH4 76 aa4.69□□□□□ -1.66
CDCA3-205ENST00000535871 GNRH2O43555 120 aa4.69□□□□□ -1.66
CDCA3-205ENST00000535871 RPL35AP18077 110 aaKnown RBP4.69□□□□□ -1.66
CDCA3-205ENST00000535871 ZNF876PQ49A33 203 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms