RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 BLOC1S6Q9UL45 172 aa6.25□□□□□ -1.41
CSDE1-215ENST00000533818 DUXBA0A1W2PPF3 345 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 DISC1C4P0D8 188 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 IGLV7-43P04211 117 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 METTL15P1P0C7V9 234 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 GZMBP10144 247 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 CAMLGP49069 296 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 RBX1P62877 108 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 MIC13Q5XKP0 118 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 JPT2Q9H910 190 aa6.24□□□□□ -1.41
CSDE1-215ENST00000533818 TRAV8-4A0A0B4J246 113 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 PTTG1O95997 202 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 P01737 135 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 NBEAP1P0C6P0 100 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 RPS19P39019 145 aaKnown RBP6.23□□□□□ -1.41
CSDE1-215ENST00000533818 UBE2D3P61077 147 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 UBE2D2P62837 147 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 RPL36AP83881 106 aaKnown RBP6.23□□□□□ -1.41
CSDE1-215ENST00000533818 REG3AQ06141 175 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 UFSP1Q6NVU6 142 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 CFAP161Q6P656 301 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 C15orf56Q8N910 161 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 RPL36ALQ969Q0 106 aaKnown RBP6.23□□□□□ -1.41
CSDE1-215ENST00000533818 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 RABL2BQ9UNT1 228 aa6.23□□□□□ -1.41
CSDE1-215ENST00000533818 F6UZH7 168 aa6.22□□□□□ -1.41
CSDE1-215ENST00000533818 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-215ENST00000533818 HIGD2BQ4VC39 106 aa6.22□□□□□ -1.41
CSDE1-215ENST00000533818 FAM162BQ5T6X4 162 aa6.22□□□□□ -1.41
CSDE1-215ENST00000533818 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
CSDE1-215ENST00000533818 DYNC2LI1Q8TCX1 351 aa6.22□□□□□ -1.41
CSDE1-215ENST00000533818 PKIGQ9Y2B9 76 aa6.22□□□□□ -1.41
CSDE1-215ENST00000533818 IGLV7-46A0A075B6I9 117 aa6.21□□□□□ -1.42
CSDE1-215ENST00000533818 TRBV7-3A0A075B6L6 115 aa6.21□□□□□ -1.42
CSDE1-215ENST00000533818 RNASE3P12724 160 aaKnown RBP6.21□□□□□ -1.42
CSDE1-215ENST00000533818 TGFBR1P36897 503 aa6.21□□□□□ -1.42
CSDE1-215ENST00000533818 CYCSP99999 105 aaKnown RBP6.21□□□□□ -1.42
CSDE1-215ENST00000533818 TMEM14EPQ6UXP3 125 aa6.21□□□□□ -1.42
CSDE1-215ENST00000533818 NRARPQ7Z6K4 114 aa6.21□□□□□ -1.42
CSDE1-215ENST00000533818 TMED6Q8WW62 240 aa6.21□□□□□ -1.42
CSDE1-215ENST00000533818 SMIM8Q96KF7 97 aa6.21□□□□□ -1.42
CSDE1-215ENST00000533818 C11orf21Q9P2W6 132 aa6.21□□□□□ -1.42
CSDE1-215ENST00000533818 RABL2AQ9UBK7 228 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-215ENST00000533818 RHODO00212 210 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 SSSCA1O60232 199 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 HPGDSO60760 199 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-215ENST00000533818 S100A10P60903 97 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 MT1HP80294 61 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 ID3Q02535 119 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 ARL16Q0P5N6 197 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 GAGE6Q13070 117 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 PIK3CD-AS1Q5SR53 167 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 SCGB3A2Q96PL1 93 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 PRRT1Q99946 306 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 GGACTQ9BVM4 153 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 TREM1Q9NP99 234 aa6.2□□□□□ -1.42
CSDE1-215ENST00000533818 CARHSP1Q9Y2V2 147 aaKnown RBP6.2□□□□□ -1.42
CSDE1-215ENST00000533818 TRBV10-1A0A0K0K1A3 114 aa6.19□□□□□ -1.42
CSDE1-215ENST00000533818 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
CSDE1-215ENST00000533818 AMTP48728 403 aa6.19□□□□□ -1.42
CSDE1-215ENST00000533818 AQP4P55087 323 aa6.19□□□□□ -1.42
CSDE1-215ENST00000533818 RAB2AP61019 212 aa6.19□□□□□ -1.42
CSDE1-215ENST00000533818 RANP62826 216 aaKnown RBP6.19□□□□□ -1.42
CSDE1-215ENST00000533818 EIF5AP63241 154 aaKnown RBP6.19□□□□□ -1.42
CSDE1-215ENST00000533818 FAM74A4Q5TZK3 123 aa6.19□□□□□ -1.42
CSDE1-215ENST00000533818 TVP23CQ96ET8 276 aa6.19□□□□□ -1.42
CSDE1-215ENST00000533818 PHYHIPLQ96FC7 376 aa6.19□□□□□ -1.42
CSDE1-215ENST00000533818 FAM25AB3EWG3 89 aa6.18□□□□□ -1.42
CSDE1-215ENST00000533818 FAM25CB3EWG5 89 aa6.18□□□□□ -1.42
CSDE1-215ENST00000533818 FAM25GB3EWG6 89 aa6.18□□□□□ -1.42
CSDE1-215ENST00000533818 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
CSDE1-215ENST00000533818 PRR27Q6MZM9 219 aa6.18□□□□□ -1.42
CSDE1-215ENST00000533818 DIRAS2Q96HU8 199 aa6.18□□□□□ -1.42
CSDE1-215ENST00000533818 SLC25A2Q9BXI2 301 aa6.18□□□□□ -1.42
CSDE1-215ENST00000533818 MIXL1Q9H2W2 232 aa6.18□□□□□ -1.42
CSDE1-215ENST00000533818 TSC22D2O75157 780 aa6.17□□□□□ -1.42
CSDE1-215ENST00000533818 AKAIN1P0CW23 69 aa6.17□□□□□ -1.42
CSDE1-215ENST00000533818 RPL29P47914 159 aaKnown RBP6.17□□□□□ -1.42
CSDE1-215ENST00000533818 CLVS1Q8IUQ0 354 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-215ENST00000533818 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
CSDE1-215ENST00000533818 BCL7BQ9BQE9 202 aa6.17□□□□□ -1.42
CSDE1-215ENST00000533818 NMES1Q9C002 83 aa6.17□□□□□ -1.42
CSDE1-215ENST00000533818 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-215ENST00000533818 GAGE12HA6NDE8 117 aa6.16□□□□□ -1.42
CSDE1-215ENST00000533818 S100A4P26447 101 aaKnown RBP6.16□□□□□ -1.42
CSDE1-215ENST00000533818 PTTG1IPP53801 180 aa6.16□□□□□ -1.42
CSDE1-215ENST00000533818 GABARAPL2P60520 117 aa6.16□□□□□ -1.42
CSDE1-215ENST00000533818 NTM-AS1Q6ZSK4 140 aa6.16□□□□□ -1.42
CSDE1-215ENST00000533818 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-215ENST00000533818 FXYD5Q96DB9 178 aa6.16□□□□□ -1.42
CSDE1-215ENST00000533818 HYLS1Q96M11 299 aa6.16□□□□□ -1.42
CSDE1-215ENST00000533818 CNBD2Q96M20 576 aa6.16□□□□□ -1.42
CSDE1-215ENST00000533818 SLIRPQ9GZT3 109 aaKnown RBP6.16□□□□□ -1.42
CSDE1-215ENST00000533818 TRAV6A0A075B6T7 132 aa6.15□□□□□ -1.42
CSDE1-215ENST00000533818 A0A087WZ39 114 aa6.15□□□□□ -1.42
CSDE1-215ENST00000533818 GVQW2A0A096LPI5 108 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-215ENST00000533818 EIF3GO75821 320 aaKnown RBP eCLIP6.15□□□□□ -1.42
CSDE1-215ENST00000533818 SSBP1Q04837 148 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms