RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 HTN1P15515 57 aa10.36□□□□□ -0.75
TRIM3-212ENST00000533064 NDUFA6P56556 154 aa10.36□□□□□ -0.75
TRIM3-212ENST00000533064 RBMY1FQ15415 496 aaKnown RBP10.36□□□□□ -0.75
TRIM3-212ENST00000533064 ANXA2RQ3ZCQ2 193 aa10.36□□□□□ -0.75
TRIM3-212ENST00000533064 C11orf21Q9P2W6 132 aa10.36□□□□□ -0.75
TRIM3-212ENST00000533064 A0A1B0GW15 77 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 CBY3A6NI87 242 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 RIGQ13278 110 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 DEFB135Q30KP9 77 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 TDRG1Q3Y452 100 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 ZNF575Q86XF7 245 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 C1orf158Q8N1D5 194 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 CSNK1G2-AS1Q8NCQ2 148 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 BORCS7Q96B45 105 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 MUC4Q99102 2169 aa10.35□□□□□ -0.75
TRIM3-212ENST00000533064 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 IGKV3D-20A0A0C4DH25 116 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 S100A4P26447 101 aaKnown RBP10.34□□□□□ -0.75
TRIM3-212ENST00000533064 CTRLP40313 264 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 CAMPP49913 170 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 Q6ZWC4 215 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 FER1L6-AS1Q8NA97 138 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 RCHY1Q96PM5 261 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 APCSP02743 223 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 S100A8P05109 93 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 ARMS2P0C7Q2 107 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 LYZL1Q6UWQ5 148 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 LINC00467Q9BRT7 94 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 TPPP3Q9BW30 176 aa10.34□□□□□ -0.75
TRIM3-212ENST00000533064 ASIPP42127 132 aa10.33□□□□□ -0.76
TRIM3-212ENST00000533064 ZNF705AQ6ZN79 300 aaPredicted RBP10.33□□□□□ -0.76
TRIM3-212ENST00000533064 GRIFINA4D1Z8 144 aa10.32□□□□□ -0.76
TRIM3-212ENST00000533064 F2Z2F3 143 aa10.32□□□□□ -0.76
TRIM3-212ENST00000533064 HOXA5P20719 270 aa10.32□□□□□ -0.76
TRIM3-212ENST00000533064 SLAQ13239 276 aa10.32□□□□□ -0.76
TRIM3-212ENST00000533064 RRN3P1Q2M238 152 aa10.32□□□□□ -0.76
TRIM3-212ENST00000533064 COA6Q5JTJ3 125 aaKnown RBP10.32□□□□□ -0.76
TRIM3-212ENST00000533064 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
TRIM3-212ENST00000533064 GNRH2O43555 120 aa10.31□□□□□ -0.76
TRIM3-212ENST00000533064 RNF183Q96D59 192 aa10.31□□□□□ -0.76
TRIM3-212ENST00000533064 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
TRIM3-212ENST00000533064 SMIM9A6NGZ8 99 aa10.31□□□□□ -0.76
TRIM3-212ENST00000533064 SPRY2O43597 315 aa10.31□□□□□ -0.76
TRIM3-212ENST00000533064 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
TRIM3-212ENST00000533064 SSBP4Q9BWG4 385 aaPredicted RBP10.31□□□□□ -0.76
TRIM3-212ENST00000533064 TP53TG3Q9ULZ0 132 aa10.31□□□□□ -0.76
TRIM3-212ENST00000533064 H3BVH4 76 aa10.3□□□□□ -0.76
TRIM3-212ENST00000533064 KIAA1644Q3SXP7 199 aa10.3□□□□□ -0.76
TRIM3-212ENST00000533064 DNLZQ5SXM8 178 aa10.3□□□□□ -0.76
TRIM3-212ENST00000533064 OR11H2Q8NH07 326 aa10.3□□□□□ -0.76
TRIM3-212ENST00000533064 TMEM263Q8WUH6 116 aaKnown RBP10.3□□□□□ -0.76
TRIM3-212ENST00000533064 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
TRIM3-212ENST00000533064 TP53TG1Q9Y2A0 90 aa10.3□□□□□ -0.76
TRIM3-212ENST00000533064 OR5AL1P0C617 328 aa10.29□□□□□ -0.76
TRIM3-212ENST00000533064 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
TRIM3-212ENST00000533064 TIMM8BQ9Y5J9 83 aaPredicted RBP10.29□□□□□ -0.76
TRIM3-212ENST00000533064 IGHV3-16A0A0C4DH30 117 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 SNAI2O43623 268 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 PRM2P04554 102 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 MED14OSP0DP75 135 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 Q0VG73 95 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 AZU1P20160 251 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 NTF3P20783 257 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 SRIP30626 198 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 DEFA6Q01524 100 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 SBSPONQ8IVN8 264 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 HIST3H2BBQ8N257 126 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 RNASE8Q8TDE3 154 aaKnown RBP10.28□□□□□ -0.76
TRIM3-212ENST00000533064 SPATA25Q9BR10 227 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 MDFICQ9P1T7 246 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 X6R8D5 127 aa10.28□□□□□ -0.76
TRIM3-212ENST00000533064 NACAE9PAV3 2078 aa10.27□□□□□ -0.77
TRIM3-212ENST00000533064 RNASE3P12724 160 aaKnown RBP10.27□□□□□ -0.77
TRIM3-212ENST00000533064 MIFP14174 115 aa10.27□□□□□ -0.77
TRIM3-212ENST00000533064 TWIST1Q15672 202 aa10.27□□□□□ -0.77
TRIM3-212ENST00000533064 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
TRIM3-212ENST00000533064 OVOL2Q9BRP0 275 aa10.27□□□□□ -0.77
TRIM3-212ENST00000533064 SPXQ9BT56 116 aa10.27□□□□□ -0.77
TRIM3-212ENST00000533064 IGHV4-4A0A075B6R2 117 aa10.26□□□□□ -0.77
TRIM3-212ENST00000533064 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
TRIM3-212ENST00000533064 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
TRIM3-212ENST00000533064 CACNG7P62955 275 aa10.26□□□□□ -0.77
TRIM3-212ENST00000533064 SPANXN1Q5VSR9 72 aa10.26□□□□□ -0.77
TRIM3-212ENST00000533064 ALKBH7Q9BT30 221 aaPredicted RBP10.26□□□□□ -0.77
TRIM3-212ENST00000533064 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
TRIM3-212ENST00000533064 GSN-AS1Q9NRJ2 163 aa10.26□□□□□ -0.77
TRIM3-212ENST00000533064 SSTP61278 116 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 C11orf72Q8NBR9 251 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 C9orf85Q96MD7 179 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 S100A2P29034 98 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 AKR1D1P51857 326 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 FAM104BQ5XKR9 115 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 BAGE3Q86Y29 109 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 SYT8Q8NBV8 401 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 OR10AG1Q8NH19 301 aa10.25□□□□□ -0.77
TRIM3-212ENST00000533064 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms