RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 HHLA3Q9XRX5 114 aa2.24□□□□□ -2.05
CLNS1A-208ENST00000527265 FN1P02751 2386 aaKnown RBP2.24□□□□□ -2.05
CLNS1A-208ENST00000527265 MYO16Q9Y6X6 1858 aa2.24□□□□□ -2.05
CLNS1A-208ENST00000527265 FREM2Q5SZK8 3169 aa2.24□□□□□ -2.05
CLNS1A-208ENST00000527265 ZNF236Q9UL36 1845 aa2.24□□□□□ -2.05
CLNS1A-208ENST00000527265 COL12A1Q99715 3063 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 PTPRSQ13332 1948 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 ADAMTS9Q9P2N4 1935 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 MYO10Q9HD67 2058 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 TRAV27A0A087WT01 109 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 A0A0J9YX75 114 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 LOC100130705A0A1B0GUX0 176 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 J3QKU1 62 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 CORTO00230 105 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 SDCBPO00560 298 aaPredicted RBP2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 UQCRQO14949 82 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 TIMM17BO60830 172 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 METTL15P1P0C7V9 234 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 ZNF705BP0CI00 300 aaPredicted RBP2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 HLA-DRB4P13762 266 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 AQP4P55087 323 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 KLRD1Q13241 179 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 ZNF181Q2M3W8 571 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 CCSMST1Q4G0I0 132 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 PABPC1L2AQ5JQF8 200 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 RNF182Q8N6D2 247 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 FAM216BQ8N7L0 139 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 SDF2Q99470 211 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 KLK12Q9UKR0 248 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 HLA-DRB4X5D2U9 266 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 ATRQ13535 2644 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 CROCCQ5TZA2 2017 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 HEATR5AQ86XA9 2040 aa2.23□□□□□ -2.05
CLNS1A-208ENST00000527265 TRPM6Q9BX84 2022 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 SCN8AQ9UQD0 1980 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 PVALEFA0A1B0GWK0 134 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 SYNGR2O43760 224 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 HBDP02042 147 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 SMIM6P0DI80 62 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 RBP2P50120 134 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 MRPS10P82664 201 aaKnown RBP2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 CDK5R1Q15078 307 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 TMEM155Q4W5P6 130 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 TMEM91Q6ZNR0 172 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 Q8IYB0 196 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 TCTEX1D1Q8N7M0 179 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 OR4B1Q8NGF8 309 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 CHCHD1Q96BP2 118 aaKnown RBP2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 MCEEQ96PE7 176 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 HIGD2AQ9BW72 106 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 NHP2Q9NX24 153 aaKnown RBP2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 COMMD3Q9UBI1 195 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 PTPRDP23468 1912 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 ITPR2Q14571 2701 aa2.22□□□□□ -2.05
CLNS1A-208ENST00000527265 TSC2P49815 1807 aa2.21□□□□□ -2.05
CLNS1A-208ENST00000527265 PATJQ8NI35 1801 aa2.21□□□□□ -2.05
CLNS1A-208ENST00000527265 NBPF19A0A087WUL8 3843 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 STAB1Q9NY15 2570 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 ANKRD36A6QL64 1941 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 IGHV3-64A0A075B6Q5 118 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 RTL8CO15255 209 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 PSCAO43653 123 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 CTSDP07339 412 aaPredicted RBP2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 TRGC1P0CF51 173 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 GNGT1P63211 74 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 MRPS36P82909 103 aaKnown RBP2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 NNATQ16517 81 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 SCIMPQ6UWF3 145 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 IGFL3Q6UXB1 125 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 AAED1Q7RTV5 226 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 TEN1Q86WV5 123 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 RPS19BP1Q86WX3 136 aaKnown RBP2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 LINC00311Q8N616 119 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 OR10AC1Q8NH08 325 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 DEDD2Q8WXF8 326 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 PDCD10Q9BUL8 212 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 TMEM191AQ9H0A3 160 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 SCN3BQ9NY72 215 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 DNAJC15Q9Y5T4 150 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 ARID1AO14497 2285 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 GREB1Q4ZG55 1949 aa2.21□□□□□ -2.06
CLNS1A-208ENST00000527265 RP1L1Q8IWN7 2480 aaPredicted RBP2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 PRR14LQ5THK1 2151 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 FBN1P35555 2871 aaKnown RBP2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 GBF1Q92538 1859 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 PKD1L1Q8TDX9 2849 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 LTBP2Q14767 1821 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 IGKV2D-24A0A075B6R9 120 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 TRAV3A0A0B4J244 114 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 C20orf202A1L168 122 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 OR51F1A6NGY5 319 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 A8MU10 97 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 TPT1P13693 172 aaKnown RBP2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 IL9P15248 144 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 GUCA1AP43080 201 aaPredicted RBP2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 SNRPD3P62318 126 aaKnown RBP2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 PLGLB1Q02325 96 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 MOBPQ13875 183 aa2.2□□□□□ -2.06
CLNS1A-208ENST00000527265 ESRGQ1W209 222 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms