RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 EMP1P54849 157 aa11.4□□□□□ -0.58
TSPAN4-213ENST00000524895 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
TSPAN4-213ENST00000524895 Q8NAQ8 132 aa11.4□□□□□ -0.58
TSPAN4-213ENST00000524895 BORCS7Q96B45 105 aa11.4□□□□□ -0.58
TSPAN4-213ENST00000524895 IMMP2LQ96T52 175 aa11.4□□□□□ -0.58
TSPAN4-213ENST00000524895 CXorf65A6NEN9 183 aa11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 F2Z2F3 143 aa11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 FAM3BP58499 235 aaPredicted RBP11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 NUP35Q8NFH5 326 aa11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 IL17DQ8TAD2 202 aa11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 SPXQ9BT56 116 aa11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 SSBP4Q9BWG4 385 aaPredicted RBP11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 SCRT2Q9NQ03 307 aa11.39□□□□□ -0.59
TSPAN4-213ENST00000524895 MUC21A0A0G2JKD1 596 aa11.38□□□□□ -0.59
TSPAN4-213ENST00000524895 MUC21A0A140T8X8 626 aa11.38□□□□□ -0.59
TSPAN4-213ENST00000524895 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
TSPAN4-213ENST00000524895 DEFB4AO15263 64 aa11.38□□□□□ -0.59
TSPAN4-213ENST00000524895 SPANXN1Q5VSR9 72 aa11.38□□□□□ -0.59
TSPAN4-213ENST00000524895 OR10AG1Q8NH19 301 aa11.38□□□□□ -0.59
TSPAN4-213ENST00000524895 NOP10Q9NPE3 64 aaKnown RBP11.38□□□□□ -0.59
TSPAN4-213ENST00000524895 URGCP-MRPS24S4R325 110 aa11.38□□□□□ -0.59
TSPAN4-213ENST00000524895 M0R2P5 195 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 M0R381 172 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 SSTP61278 116 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 CACNG7P62955 275 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 DAZ2Q13117 558 aaKnown RBP11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 TMEM88Q6PEY1 159 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 CBLN2Q8IUK8 224 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 ZFP82Q8N141 532 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 SYT8Q8NBV8 401 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 SMCO4Q9NRQ5 59 aa11.37□□□□□ -0.59
TSPAN4-213ENST00000524895 A0A1B0GUT8 65 aa11.36□□□□□ -0.59
TSPAN4-213ENST00000524895 SPINK4O60575 86 aa11.36□□□□□ -0.59
TSPAN4-213ENST00000524895 ZNF876PQ49A33 203 aa11.36□□□□□ -0.59
TSPAN4-213ENST00000524895 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
TSPAN4-213ENST00000524895 TRGV1A0A0A0MS02 117 aa11.35□□□□□ -0.59
TSPAN4-213ENST00000524895 SCO1O75880 301 aa11.35□□□□□ -0.59
TSPAN4-213ENST00000524895 NHLRC4P0CG21 123 aaPredicted RBP11.35□□□□□ -0.59
TSPAN4-213ENST00000524895 BTF3L4Q96K17 158 aa11.35□□□□□ -0.59
TSPAN4-213ENST00000524895 CNFNQ9BYD5 112 aa11.35□□□□□ -0.59
TSPAN4-213ENST00000524895 C11orf68Q9H3H3 251 aaKnown RBP11.35□□□□□ -0.59
TSPAN4-213ENST00000524895 TRAV9-1A0A075B6T8 112 aa11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 LYRM9A8MSI8 78 aa11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 NXPH4O95158 308 aa11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 RIGQ13278 110 aa11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 TWIST1Q15672 202 aa11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 LGALS9BQ3B8N2 356 aa11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 MRPL54Q6P161 138 aaKnown RBP11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 WDR73Q6P4I2 378 aa11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 PTH2Q96A98 100 aa11.34□□□□□ -0.59
TSPAN4-213ENST00000524895 IGHV4-4A0A075B6R2 117 aa11.33□□□□□ -0.6
TSPAN4-213ENST00000524895 A0A0J9YWU9 116 aa11.33□□□□□ -0.6
TSPAN4-213ENST00000524895 NTF3P20783 257 aa11.33□□□□□ -0.6
TSPAN4-213ENST00000524895 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
TSPAN4-213ENST00000524895 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
TSPAN4-213ENST00000524895 Q6ZTI0 123 aa11.33□□□□□ -0.6
TSPAN4-213ENST00000524895 ATP5L2Q7Z4Y8 100 aa11.33□□□□□ -0.6
TSPAN4-213ENST00000524895 TEX48A0A1B0GUV7 120 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 A0A1B0GW15 77 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 GAGE7O76087 117 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 SPART-AS1P0CW21 52 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 HBBP68871 147 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 ELOBQ15370 118 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 PIK3CD-AS1Q5SR53 167 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 RASL10AQ92737 203 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 AP1S3Q96PC3 154 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 NDUFAF3Q9BU61 184 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 DKK2Q9UBU2 259 aa11.32□□□□□ -0.6
TSPAN4-213ENST00000524895 S100A8P05109 93 aa11.31□□□□□ -0.6
TSPAN4-213ENST00000524895 TRGC1P0CF51 173 aa11.31□□□□□ -0.6
TSPAN4-213ENST00000524895 DEFB130BP0DP73 79 aa11.31□□□□□ -0.6
TSPAN4-213ENST00000524895 DEFB130AP0DP74 79 aa11.31□□□□□ -0.6
TSPAN4-213ENST00000524895 CAMPP49913 170 aa11.31□□□□□ -0.6
TSPAN4-213ENST00000524895 SMIM15Q7Z3B0 74 aa11.31□□□□□ -0.6
TSPAN4-213ENST00000524895 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
TSPAN4-213ENST00000524895 CELA1Q9UNI1 258 aa11.31□□□□□ -0.6
TSPAN4-213ENST00000524895 TENM3Q9P273 2699 aa11.3□□□□□ -0.6
TSPAN4-213ENST00000524895 TRGV2A0A075B6R0 118 aa11.3□□□□□ -0.6
TSPAN4-213ENST00000524895 TGIF2-C20orf24A0A0A6YYL0 155 aa11.3□□□□□ -0.6
TSPAN4-213ENST00000524895 A0A1B0GXF2 115 aa11.3□□□□□ -0.6
TSPAN4-213ENST00000524895 MUC4Q99102 2169 aa11.29□□□□□ -0.6
TSPAN4-213ENST00000524895 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
TSPAN4-213ENST00000524895 A8MWV9 139 aa11.29□□□□□ -0.6
TSPAN4-213ENST00000524895 SMIM17P0DL12 118 aa11.29□□□□□ -0.6
TSPAN4-213ENST00000524895 DAD1P61803 113 aa11.29□□□□□ -0.6
TSPAN4-213ENST00000524895 LINC00612Q8N6U2 182 aa11.29□□□□□ -0.6
TSPAN4-213ENST00000524895 YPEL4Q96NS1 127 aa11.29□□□□□ -0.6
TSPAN4-213ENST00000524895 RAB4BP61018 213 aa11.28□□□□□ -0.6
TSPAN4-213ENST00000524895 RASL11AQ6T310 242 aa11.28□□□□□ -0.6
TSPAN4-213ENST00000524895 C14orf178Q8N769 122 aaPredicted RBP11.28□□□□□ -0.6
TSPAN4-213ENST00000524895 FAM210BQ96KR6 192 aa11.28□□□□□ -0.6
TSPAN4-213ENST00000524895 JPT2Q9H910 190 aa11.28□□□□□ -0.6
TSPAN4-213ENST00000524895 FBN3Q75N90 2809 aa11.28□□□□□ -0.6
TSPAN4-213ENST00000524895 A0A087WWL8 130 aa11.27□□□□□ -0.61
TSPAN4-213ENST00000524895 TRAV4A0A0B4J268 109 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms