RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 ZNF818PQ6ZRF7 136 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 NABP2Q9BQ15 211 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 PRO1854Q9UHT4 67 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 PLXNB3Q9ULL4 1909 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 MGAMO43451 1857 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 TMEM30CPA0ZSE6 113 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 COX6CP09669 75 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
SDC2-208ENST00000523877 NPPCP23582 126 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 ZNF826PQ6ZT77 177 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 MIR17HGQ75NE6 70 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 RMI2Q96E14 147 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 TMEM141Q96I45 108 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 PHLDA3Q9Y5J5 127 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 TRPM6Q9BX84 2022 aa4.78□□□□□ -1.64
SDC2-208ENST00000523877 XIRP2A4UGR9 3374 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 F8WEM9 126 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 C18orf65Q6ZTR6 163 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 RPS27LQ71UM5 84 aaKnown RBP4.77□□□□□ -1.65
SDC2-208ENST00000523877 CCL4L1Q8NHW4 92 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 DOCK7Q96N67 2140 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 C8orf49Q96NF6 230 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 SMAD5-AS1Q9Y6J3 95 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.77□□□□□ -1.65
SDC2-208ENST00000523877 GREB1Q4ZG55 1949 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 KMT2BQ9UMN6 2715 aaPredicted RBP4.77□□□□□ -1.65
SDC2-208ENST00000523877 USP34Q70CQ2 3546 aa4.77□□□□□ -1.65
SDC2-208ENST00000523877 IGLV3-32A0A0A0MS00 114 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 TRBV30A0A0K0K1B3 111 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 TRBV10-3A0A0K0K1G6 114 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 TMEM223A0PJW6 202 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 C3orf84H3BNL1 204 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 RNASE1P07998 156 aaKnown RBP4.76□□□□□ -1.65
SDC2-208ENST00000523877 GNLYP22749 145 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 BSPH1Q075Z2 132 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 FNDC1Q4ZHG4 1894 aaPredicted RBP4.76□□□□□ -1.65
SDC2-208ENST00000523877 ODF3L1Q8IXM7 274 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 ORMDL3Q8N138 153 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 SMCR5Q8TEV8 140 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 PROK2Q9HC23 129 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 BAHCC1Q9P281 2608 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 NDUFA12Q9UI09 145 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 UBE2D4Q9Y2X8 147 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 C5orf42Q9H799 3197 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 NUP98P52948 1817 aa4.76□□□□□ -1.65
SDC2-208ENST00000523877 PLXNA3P51805 1871 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 CFAP54Q96N23 3096 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 FAM72CH0Y354 149 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 LEPROTO15243 131 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 SH2D1AO60880 128 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 ERC2-IT1O76042 136 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 MIFP14174 115 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 ZNF32P17041 273 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 SYCNQ0VAF6 134 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 FAM72DQ6L9T8 149 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 Q6ZPA2 131 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 DYNAPQ8N1N2 210 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 FAM218AQ96MZ4 157 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 PLA2G2DQ9UNK4 145 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 NCOR1O75376 2440 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 SCN3AQ9NY46 2000 aa4.75□□□□□ -1.65
SDC2-208ENST00000523877 PTPRSQ13332 1948 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 IGHV4-34P06331 123 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 CFC1BP0CG36 223 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 CFC1P0CG37 223 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 PLNP26678 52 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 NANOS3P60323 173 aaKnown RBP4.74□□□□□ -1.65
SDC2-208ENST00000523877 Q8N6K4 173 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 ZNF525Q8N782 197 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 PRSS3P2Q8NHM4 247 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 SCGB3A1Q96QR1 104 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 PLA2G12AQ9BZM1 189 aa4.74□□□□□ -1.65
SDC2-208ENST00000523877 IGHV3OR16-12A0A075B7B8 117 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 IGHV5-51A0A0C4DH38 117 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 ZNF503-AS2A6NEH8 195 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 H7C423 109 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 GNRH2O43555 120 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 FRMD6-AS1P0C7T7 363 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 IGHV3-43DP0DP04 118 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
SDC2-208ENST00000523877 C17orf82Q86X59 251 aaPredicted RBP4.73□□□□□ -1.65
SDC2-208ENST00000523877 FAM167A-AS1Q96KT0 104 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 DCHS1Q96JQ0 3298 aa4.73□□□□□ -1.65
SDC2-208ENST00000523877 NCOA6Q14686 2063 aaPredicted RBP4.73□□□□□ -1.65
SDC2-208ENST00000523877 KIAA1549LQ6ZVL6 1849 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 IGKV2D-26A0A0A0MRZ7 120 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 ZNF815PA8K554 130 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 SPINK4O60575 86 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 IGLV2-8P01709 118 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 REG3AQ06141 175 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 ADAMTSL4-AS1Q5T5F5 129 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 GDF5OSQ5U4N7 250 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 FAM168AQ92567 244 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 GFRA4Q9GZZ7 299 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 XAGE1AQ9HD64 81 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 COL4A1P02462 1669 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms